Update live ebuild for upstream svm->github migration, bug 338362. Thanks to Joel Berendzen

Package-Manager: portage-2.2_rc86/cvs/Linux x86_64

4 files changed, 8 insertions, 38 deletions

diff --git a/sci-biology/bioperl-db/Manifest b/sci-biology/bioperl-db/Manifest
index ff24453524bf..102c006f54ab 100644
--- a/sci-biology/bioperl-db/Manifest
+++ b/sci-biology/bioperl-db/Manifest
@@ -1,15 +1,5 @@
------BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA1
-
 DIST BioPerl-db-1.6.0.tar.bz2 296041 RMD160 6cae2b39b4e46b30f7f378e22ca565fb9f9cfbeb SHA1 7bbfe5ef163dca332531372dd728161e89bd7bb8 SHA256 81710b9c6d021511b8ad19d106309f76ef3111015873a56af9b109902d24a699
 EBUILD bioperl-db-1.6.0.ebuild 934 RMD160 3174e0d009ef1a97f67afb510156b0c0f07ede03 SHA1 bc1de7c9c854933a884fdcb977ef2c225b8bdf91 SHA256 09aadf2bd39f97517e6743bcc179812133f7f35bf5feabf3dd21f5a638c374a5
-EBUILD bioperl-db-9999.ebuild 947 RMD160 13fb5183c0387c5cca0056928239e122242d443d SHA1 ef1dc28f4ce50e83cdbedbb7b2ef5fd094bccf90 SHA256 acc6b9db340796d3971b924ef03dac369968c19dc322981083bff0eff17e5915
-MISC ChangeLog 833 RMD160 bf3676984d2573b9ca29d0459ed6a28e8509070d SHA1 2c3542a6e92b4840b9e255613efecb46a7a801aa SHA256 c51ba862942bd9412958c2bb73e30b709a24c2409fe93b1b5f9530bb4c5b1362
+EBUILD bioperl-db-9999-r1.ebuild 934 RMD160 d54adbeb27dea092acc00011df5413f17502683a SHA1 8333aebcccfd6541eac7d5da5883da079d52562f SHA256 b9ab055cf75c3748f4ea8dd7f5426e85d036baa34002bac7710cea5e0b03837e
+MISC ChangeLog 1070 RMD160 64a3a66f81cf0141e222a0fe07bdb8387c8f0370 SHA1 1b80006232a210428cef6508c57bae0c3507148f SHA256 e068bc8227908707f652ebf342d1090b7915108a7113e1bf40bc1b5598bee00f
 MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
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-
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-sW8AoJGdHAQp2UqAeqZ3FSMujXaNFgmc
-=bRyJ
------END PGP SIGNATURE-----
diff --git a/sci-biology/bioperl-network/Manifest b/sci-biology/bioperl-network/Manifest
index e75119de3dc5..61066f4b3e57 100644
--- a/sci-biology/bioperl-network/Manifest
+++ b/sci-biology/bioperl-network/Manifest
@@ -1,15 +1,5 @@
------BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA1
-
 DIST BioPerl-network-1.6.0.tar.bz2 902029 RMD160 d7152d5917849c40527c56ff07c956fd3c292a1d SHA1 5d5da9f329a97a47939038f6be91f6628c25213c SHA256 1f9e48d7bf1b563fef235eede9524f8446a0374b65c6bf522f3203ed61164cb3
 EBUILD bioperl-network-1.6.0.ebuild 780 RMD160 398e1681875664efb5df0de7d66d111672168c5d SHA1 ce80e7d52ba552d0f4fc6fa3a93bad8563eb8c83 SHA256 86b66bb3c29afa80280903fd09bac7220494b896ae1e53b8dddf1132f7e49ec1
-EBUILD bioperl-network-9999.ebuild 788 RMD160 017116a6da46bc6e4a08f90497d6d40577ec6c86 SHA1 6221ba00cd8de834a30e08a22233831a46669220 SHA256 3f9dee6251949af80894da99da084a2e33d1ab72d7c2e87c5df7e77cf7dec4f8
-MISC ChangeLog 885 RMD160 4f8996f37147dc372d9d786f70ec8989e6785f26 SHA1 7f06dfbcfddd9a0c66c971a868add52b7bab3c8e SHA256 ddb9660caa3235517a78d2fcc6230e330c27d01a92a74acc83ddb4d81230ce18
+EBUILD bioperl-network-9999-r1.ebuild 775 RMD160 48900a156e04e2593dcd1135e2c985d815a23662 SHA1 80ae3d4101b3bb425764ecbc2c780706b04ddcfb SHA256 07899d61fde10885d46032010699d88c263d1c04e069424a360dbc249f10e87f
+MISC ChangeLog 1137 RMD160 a38e0388334c8f91e109f62263c4f1c4db841772 SHA1 fa9aac6dc815756df4458dc4b95ed097973ba3c6 SHA256 9ac27100ee52816b65f486cc9b6fc195e4ed905c6556f61feb0759d074f6f8f1
 MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
------BEGIN PGP SIGNATURE-----
-Version: GnuPG v2.0.11 (GNU/Linux)
-
-iEYEARECAAYFAkoxXEsACgkQkKaRLQcq0GLDpgCgj86iKoyPAY8VFebGDxTEYQzM
-qUEAn34gC1/Cx7i0Yp2B2tiPMqzUDdgn
-=MrU2
------END PGP SIGNATURE-----
diff --git a/sci-biology/bioperl-run/Manifest b/sci-biology/bioperl-run/Manifest
index 1b974f3379aa..e57be428f1c0 100644
--- a/sci-biology/bioperl-run/Manifest
+++ b/sci-biology/bioperl-run/Manifest
@@ -1,6 +1,3 @@
------BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA1
-
 AUX bioperl-run-Pise-test-patch.diff 722 RMD160 85c3744bfc14db91971e4df2dfd967c5ad9f0310 SHA1 0498546ae9f12d0db5194c41a360910833870eac SHA256 84c8280f8d3af311b53c8b6edd4e6ffa9acc0824528d96d7f1c2537404d3e30f
 DIST BioPerl-run-1.6.1.tar.bz2 3968370 RMD160 16654d46d3b5c42c984165ef3e0de93a3b01b015 SHA1 9577201381c34290a34a74aac1f3c35df28f0938 SHA256 16f406d196b6e6d063f4ef518161571ea27909c5b47184d9eddf1eb9da147f53
 DIST bioperl-run-1.4.tar.gz 830774 RMD160 264f9826e4d92c3cac96937b73db9bcc96b9eea8 SHA1 578434800872a41631d1bf2b632f3ef0475a24a1 SHA256 54eea327c8f80061d6c45e56b64d5c51daa20b723390eed1a3377f3a61645d86
@@ -8,13 +5,6 @@ DIST bioperl-run-1.5.1.tar.gz 864369 RMD160 841e33cffda7b787b1700a075bf985c717d7
 EBUILD bioperl-run-1.4.ebuild 1273 RMD160 c96f8714c1a4a4386706f4296572e7e8240e2989 SHA1 142de2a107e8a5020b46973c816ac69e176b2f9f SHA256 17cffd41ea3b90f8f7f4ea71b56b7c04e4f7f2a8a756e1c725d864c4dece2539
 EBUILD bioperl-run-1.5.1.ebuild 1288 RMD160 c3b8b7a28ef8ca2884e77ad5c125fb12a34db0be SHA1 97d54cb97995e08bd02deeafd8dd9c093b461a2b SHA256 d5b066528a330c5a88f1f4c9925185a7efbe7605d27b3ca7dc46e00046943aea
 EBUILD bioperl-run-1.6.1.ebuild 1105 RMD160 f99555fe437f930279cff805bc12e14151e8ae90 SHA1 e51f5523cffeded8aff7b01b6d2fa58529f1256a SHA256 beb92bf8a0385ae0111496401c599947ae80702eb529cfcbd4adc6cd5d7b3fc5
-EBUILD bioperl-run-9999.ebuild 1096 RMD160 f4e0ae6ac4a3019936d3d8573ea72819cf2c9c1a SHA1 f7759d5c96f1b6c84941a88d2249f9105858a3b8 SHA256 2bbd1d9fc4098e5a44c5ccac12d4b41a2593258f72c005b5ec567c0d8c58f4c7
-MISC ChangeLog 3553 RMD160 748e5262f43d5dd0bc4f2013c6ef4bb225b46c62 SHA1 6e5ab892b925685a119cc95e0d7bba569e652b0b SHA256 bb7d0dff2d74d157dd916af2262d6e866f8ad408d58bf7a07b2a3e2e1b31b829
+EBUILD bioperl-run-9999-r1.ebuild 1083 RMD160 4bd823c2c99499bd2d785a72e155412b001bf27f SHA1 7df9079774ba4e06ed68a087be592df0b5ab7edd SHA256 bb0847a9600cc3a6f6640fcff36b13cd63136196649ea0a8d3ea1c0ecdf1d5e1
+MISC ChangeLog 3793 RMD160 621536da372a13b61396ca0b82caaa05f8127e1c SHA1 147900043ddd225f84cedb5328e431223baff215 SHA256 d5dd021729d8a65b3c856df03f9d3bfeece582cd04174c5019af81bed21e50db
 MISC metadata.xml 165 RMD160 b247a16b6552b292d1249ff4e8ea5060ad2c4372 SHA1 a9f91a3a303f4c85430e21eca09913e1c9426366 SHA256 560c375768c8e164d954d61924f110da785b4771012cb830963eaa267a319132
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-QbQAoIokHCoIl//mhV8lqHDdYxsaKLAK
-=E19G
------END PGP SIGNATURE-----
diff --git a/sci-biology/mira/Manifest b/sci-biology/mira/Manifest
index 77f02970e1c1..f2824e19baab 100644
--- a/sci-biology/mira/Manifest
+++ b/sci-biology/mira/Manifest
@@ -3,6 +3,6 @@ DIST mira-3.0.5.tar.bz2 7132355 RMD160 206f209dec8ac32f8192160a7642e3d27a42df25
 DIST mira-3.2.0.tar.bz2 12454646 RMD160 d079e4f1fe92e423c8c8c7530d3658ec37fd18eb SHA1 c77cb19d0af618b5d98d9a30ed83a93f23e7a743 SHA256 0cd2e9d5541046c020faecd5adbbc57a32ba15cc11a36aa5f49f51096c69d15c
 DIST mira_3rdparty_17-04-2010.tar.bz2 31296 RMD160 888a38f865963b3109d3a331604e079010b55d81 SHA1 5f2fbe3e2e1bb5c5de44d414963e57b8dbcf760c SHA256 ec2c77508d75b7c28d3d26137ab69648b1ed653af93d486245ad0e4624e332b2
 EBUILD mira-3.0.5.ebuild 1511 RMD160 2202261d79da75665535dae8998892488bb53b62 SHA1 7e91ed3e978eb25b201a404ae027978d77c9811d SHA256 1d1d6859664999c3f6a713478184d2f941e685d6e8a057cb61618da4e0868e58
-EBUILD mira-3.2.0.ebuild 1516 RMD160 219b6ebe2b74b36f7ba8538e7e467f93050ed8e9 SHA1 91445302a78ca9cdd3497a3ecf9ab3bf6d16029a SHA256 d6c9dec85881ac6c7bc16ed03b49e709e179abaae6b8b41ae93d53f3e3f59f94
-MISC ChangeLog 1585 RMD160 b9e96405bece35d100cdcf2e88758cf827009574 SHA1 6e8e6d14547b0dd6e413bbda757fa6c732e1abc0 SHA256 181736f9b063b2253be1f210fe4dc93e49666b100bd42439433f77786b71f815
+EBUILD mira-3.2.0.ebuild 1534 RMD160 7276de923437c6bd14c90761f8708c6cbdab7f64 SHA1 69670fa0f50351b73bfd40b34c82148af099fe24 SHA256 a517b7fd54ce5c20f174d87b4c96a245b303769003c935e7ac10d88bece54373
+MISC ChangeLog 1719 RMD160 f7421e40f3065758652b193f2a5c3703292fec0b SHA1 57eb0884d3e9ef07485a65255d1ac32cc35deebe SHA256 d7de5a98583214c954bb642cf19528d2b662b310846d2f0f8aebdca885ee3c10
 MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110