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authorAndrey Kislyuk <weaver@gentoo.org>2009-05-24 15:56:55 +0000
committerAndrey Kislyuk <weaver@gentoo.org>2009-05-24 15:56:55 +0000
commit55c0f60a385f55cacf3af7f8819d27c3e58d3bef (patch)
tree30b0bc2d999dc279b1c7600c9cfca9989156a507 /sci-biology/bioperl
parentBump to 2.26.2. Greek and Spanish translation updates, and a sound-related bu... (diff)
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Moved Bio-ASN1-EntrezGene to PDEPEND per bug 269583
Package-Manager: portage-2.2_rc30/cvs/Linux x86_64
Diffstat (limited to 'sci-biology/bioperl')
-rw-r--r--sci-biology/bioperl/ChangeLog6
-rw-r--r--sci-biology/bioperl/Manifest6
-rw-r--r--sci-biology/bioperl/bioperl-1.6.0-r2.ebuild5
-rw-r--r--sci-biology/bioperl/bioperl-9999.ebuild4
4 files changed, 12 insertions, 9 deletions
diff --git a/sci-biology/bioperl/ChangeLog b/sci-biology/bioperl/ChangeLog
index bb59a2a99646..7256e865490c 100644
--- a/sci-biology/bioperl/ChangeLog
+++ b/sci-biology/bioperl/ChangeLog
@@ -1,6 +1,10 @@
# ChangeLog for sci-biology/bioperl
# Copyright 2002-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/ChangeLog,v 1.38 2009/05/13 16:18:34 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/ChangeLog,v 1.39 2009/05/24 15:56:55 weaver Exp $
+
+ 24 May 2009; Andrey Kislyuk <weaver@gentoo.org> bioperl-1.6.0-r2.ebuild,
+ bioperl-9999.ebuild:
+ Moved Bio-ASN1-EntrezGene to PDEPEND per bug 269583
13 May 2009; Andrey Kislyuk <weaver@gentoo.org> bioperl-9999.ebuild:
Override depend on perl 5.10
diff --git a/sci-biology/bioperl/Manifest b/sci-biology/bioperl/Manifest
index 33ed56e183a3..e7fc25fc7c5f 100644
--- a/sci-biology/bioperl/Manifest
+++ b/sci-biology/bioperl/Manifest
@@ -3,7 +3,7 @@ DIST bioperl-1.4.tar.bz2 4224508 RMD160 657170cc17655f2ab9ed5f6509cac5ae7eedd2c3
DIST bioperl-1.5.1.tar.bz2 5538613 RMD160 422bdd0dc17dd246ec1fc3ae6fe020705111892d SHA1 9841a458fd928eb9715f14eb686c7b1af3a379e7 SHA256 696c8bd162bc79fa3c75eeb63bb42f8cbcbb4b72de4dcb3bec7ea7a293506f6c
EBUILD bioperl-1.4.ebuild 1144 RMD160 7e3108360f973a5199cfe5d89471980fdf475813 SHA1 da03c6457bb8feefd939ec532c0292a31eeb3c57 SHA256 1f9f7fba2480c392b99e860af10910a881e39af8123540bc8e7e6ccf206cf741
EBUILD bioperl-1.5.1-r1.ebuild 1191 RMD160 1ad0bd41869118ce4482427e7de56829f7fe22ce SHA1 c50b157d571897c896b678d6456f0f7bbed3b60b SHA256 bdee9659d5d464c2339678c1854bac42cf83e900d20380d6c4c3f1ff1606d504
-EBUILD bioperl-1.6.0-r2.ebuild 1804 RMD160 841017ffb6beb70af54040100f0e442f88d0340a SHA1 7d78bfdbd48dfbd7f4d4d24bcc70c7307576a526 SHA256 0bc3737003ca752a2d2a1e835b44564ee0787cc613b9491acb38db0ad00e5593
-EBUILD bioperl-9999.ebuild 1883 RMD160 7b8b40f0b30c1ac25964bb0446814019eb652338 SHA1 6bcd955c74f43d85155c6adca5dfd10c0fc97423 SHA256 17e42681b28e7d85b144b3f3e2b57fbafeb333de56ee687097913e921e72ecfa
-MISC ChangeLog 7548 RMD160 2d0c40fa13738e13d03e6b18ec6c7f11a78af1fd SHA1 4f7207090b823ac1213a47ee43c2f2c5b55a6d06 SHA256 0c243c30348e682bd45ca7b7f82d9fffac8ccd11de4a4c8ef2bf2880ecb7e164
+EBUILD bioperl-1.6.0-r2.ebuild 1815 RMD160 8c28a7e897054e5f22ed5379c140f500322781a5 SHA1 3f7b8ef582b5f2f66a2fea2fe2b028ffcb9ca79a SHA256 fa288c2e7c3f496ebd27711e32968b5b1305927e0393d70d6fb30634e0aaa0c2
+EBUILD bioperl-9999.ebuild 1925 RMD160 6ffb12ae413f8dc0f3f9716020dd95b4340c8238 SHA1 011dfca2b235eb7570721e744a86ad167552b57c SHA256 8622dc20d5b1793599196ced5dcf5869aea7b3bd90407b5d44ec9553ce2d642c
+MISC ChangeLog 7701 RMD160 282be14bc25acf373d46af9984aed1eb7e242e94 SHA1 afd43b1b270013f087f5f44c2ea8d3a7c9f6b3d8 SHA256 64708a55935b116671d02f1c0a8cca846325cc315be9a5d912e6633047afccbe
MISC metadata.xml 357 RMD160 3cd4b6e41d2a1d5ec431a90e0c59ef887f1d5706 SHA1 5a81dea20ab58342851c77d5fd7a2835053ac03b SHA256 be157b353d49731ed3ade95f20205bf367b65ff762d336042e26bca078609afa
diff --git a/sci-biology/bioperl/bioperl-1.6.0-r2.ebuild b/sci-biology/bioperl/bioperl-1.6.0-r2.ebuild
index f4573311a8e3..90cf49dcba67 100644
--- a/sci-biology/bioperl/bioperl-1.6.0-r2.ebuild
+++ b/sci-biology/bioperl/bioperl-1.6.0-r2.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2009 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-1.6.0-r2.ebuild,v 1.2 2009/05/13 15:49:09 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-1.6.0-r2.ebuild,v 1.3 2009/05/24 15:56:55 weaver Exp $
EAPI="2"
@@ -21,7 +21,6 @@ CDEPEND="dev-perl/Data-Stag
dev-perl/libwww-perl
!minimal? (
dev-perl/Ace
- dev-perl/Bio-ASN1-EntrezGene
dev-perl/Spreadsheet-ParseExcel
dev-perl/Spreadsheet-WriteExcel
>=dev-perl/XML-SAX-0.15
@@ -50,7 +49,7 @@ CDEPEND="dev-perl/Data-Stag
DEPEND="virtual/perl-Module-Build
${CDEPEND}"
RDEPEND="${CDEPEND}"
-PDEPEND="
+PDEPEND="!minimal? ( dev-perl/Bio-ASN1-EntrezGene )
db? ( >=sci-biology/bioperl-db-${PV} )
network? ( >=sci-biology/bioperl-network-${PV} )
run? ( >=sci-biology/bioperl-run-${PV} )"
diff --git a/sci-biology/bioperl/bioperl-9999.ebuild b/sci-biology/bioperl/bioperl-9999.ebuild
index bdadfc580c10..aff20d655936 100644
--- a/sci-biology/bioperl/bioperl-9999.ebuild
+++ b/sci-biology/bioperl/bioperl-9999.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2009 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-9999.ebuild,v 1.4 2009/05/13 16:18:34 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-9999.ebuild,v 1.5 2009/05/24 15:56:55 weaver Exp $
EAPI="2"
@@ -51,7 +51,7 @@ CDEPEND="dev-perl/Data-Stag
DEPEND="virtual/perl-Module-Build
${CDEPEND}"
RDEPEND="${CDEPEND}"
-PDEPEND="
+PDEPEND="!minimal? ( dev-perl/Bio-ASN1-EntrezGene )
db? ( >=sci-biology/bioperl-db-${PV} )
network? ( >=sci-biology/bioperl-network-${PV} )
run? ( >=sci-biology/bioperl-run-${PV} )"