sci-biology/clustalw: Drop old and clean base.eclass usage

Package-Manager: portage-2.2.8/cvs/Linux x86_64
Manifest-Sign-Key: 0xB9D4F231BD1558AB!

6 files changed, 23 insertions, 124 deletions

diff --git a/sci-biology/clustalw/ChangeLog b/sci-biology/clustalw/ChangeLog
index 4933f03e111a..c753f3a6aad7 100644
--- a/sci-biology/clustalw/ChangeLog
+++ b/sci-biology/clustalw/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/clustalw
-# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalw/ChangeLog,v 1.28 2013/03/11 14:56:20 jlec Exp $
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalw/ChangeLog,v 1.29 2014/01/06 08:25:30 jlec Exp $
+
+  06 Jan 2014; Justin Lecher <jlec@gentoo.org> -clustalw-1.83-r2.ebuild,
+  -clustalw-1.83-r3.ebuild, -clustalw-2.0.11.ebuild, -clustalw-2.0.12.ebuild:
+  Drop old and clean base.eclass usage
 
   11 Mar 2013; Justin Lecher <jlec@gentoo.org> metadata.xml:
   Drop Andrey as maintainer so that bugs get assigned to sci-biology directly
diff --git a/sci-biology/clustalw/Manifest b/sci-biology/clustalw/Manifest
index 14bb05b59e47..36ad9c8e4fcd 100644
--- a/sci-biology/clustalw/Manifest
+++ b/sci-biology/clustalw/Manifest
@@ -1,22 +1,25 @@
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+Hash: SHA512
 
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-DIST clustalw-2.0.12.tar.gz 328025 SHA256 f364fbc9401615b9be91f36562011ca711b840fae4cbfa129b4e13b0b8fc1540
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 EBUILD clustalw-2.1.ebuild 516 SHA256 2c2d4060a87306c9ae420dddd5d0642d2bf8e487110ed2f94806979dfdb66691 SHA512 ce35005115c4d79b113b3f6f4daeb69769e84b8e365e0657fb183b0172137ad0f1ec2a59a4f039cb730ea8ac2bd3a697dd25ac706038865f4938400ccb56b56a WHIRLPOOL cb2a21aa03c7567759956e6477c8407e19b909c4f109bfbb62aaadba6c322a9cc1aae926d759b20b7b15735ff8c72a7ffa7bc0dcd0db178f185aa792ccdf84fa
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diff --git a/sci-biology/clustalw/clustalw-1.83-r2.ebuild b/sci-biology/clustalw/clustalw-1.83-r2.ebuild
deleted file mode 100644
index 75a0f6c4d7e0..000000000000
--- a/sci-biology/clustalw/clustalw-1.83-r2.ebuild
+++ /dev/null
@@ -1,36 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalw/clustalw-1.83-r2.ebuild,v 1.4 2009/08/18 17:24:32 weaver Exp $
-
-inherit toolchain-funcs
-
-DESCRIPTION="General purpose multiple alignment program for DNA and proteins"
-HOMEPAGE="http://www.embl-heidelberg.de/~seqanal/"
-SRC_URI="ftp://ftp.ebi.ac.uk/pub/software/unix/clustalw/${PN}${PV}.UNIX.tar.gz"
-
-LICENSE="clustalw"
-SLOT="1"
-KEYWORDS="alpha amd64 ppc ppc64 sparc x86"
-IUSE=""
-
-S="${WORKDIR}"/${PN}${PV}
-
-src_unpack() {
-	unpack ${A}
-	cd "${S}"
-	sed -i -e "s/CC	= cc/CC	= $(tc-getCC)/" \
-		-e "s/CFLAGS  = -c -O/CFLAGS  = -c ${CFLAGS}/" \
-		-e "s/LFLAGS	= -O -lm/LFLAGS	= -lm ${CFLAGS}/" makefile || die
-	sed -i -e "s%clustalw_help%/usr/share/doc/${PF}/clustalw_help%" clustalw.c || die
-}
-
-src_compile() {
-	emake || die
-}
-
-src_install() {
-	dobin clustalw || die
-	dodoc README clustalv.doc clustalw.doc clustalw.ms
-	insinto /usr/share/doc/${PF}
-	doins clustalw_help
-}
diff --git a/sci-biology/clustalw/clustalw-1.83-r3.ebuild b/sci-biology/clustalw/clustalw-1.83-r3.ebuild
deleted file mode 100644
index 8b2fd36e6ec7..000000000000
--- a/sci-biology/clustalw/clustalw-1.83-r3.ebuild
+++ /dev/null
@@ -1,36 +0,0 @@
-# Copyright 1999-2010 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalw/clustalw-1.83-r3.ebuild,v 1.2 2010/01/02 18:31:12 fauli Exp $
-
-EAPI="2"
-
-inherit base toolchain-funcs
-
-DESCRIPTION="General purpose multiple alignment program for DNA and proteins"
-HOMEPAGE="http://www.embl-heidelberg.de/~seqanal/"
-SRC_URI="ftp://ftp.ebi.ac.uk/pub/software/unix/clustalw/${PN}${PV}.UNIX.tar.gz"
-
-LICENSE="clustalw"
-SLOT="1"
-KEYWORDS="~alpha ~amd64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris"
-IUSE=""
-
-S="${WORKDIR}"/${PN}${PV}
-
-PATCHES=(
-	"${FILESDIR}"/${PV}-as-needed.patch
-)
-
-src_prepare() {
-	base_src_prepare
-	sed -i -e "s/CC	= cc/CC	= $(tc-getCC)/" \
-		makefile || die
-	sed -i -e "s%clustalw_help%/usr/share/doc/${PF}/clustalw_help%" clustalw.c || die
-}
-
-src_install() {
-	dobin clustalw || die
-	dodoc README clustalv.doc clustalw.doc clustalw.ms
-	insinto /usr/share/doc/${PF}
-	doins clustalw_help
-}
diff --git a/sci-biology/clustalw/clustalw-2.0.11.ebuild b/sci-biology/clustalw/clustalw-2.0.11.ebuild
deleted file mode 100644
index 18b0c6b68ef0..000000000000
--- a/sci-biology/clustalw/clustalw-2.0.11.ebuild
+++ /dev/null
@@ -1,18 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalw/clustalw-2.0.11.ebuild,v 1.3 2009/09/22 11:37:55 maekke Exp $
-
-EAPI=2
-
-DESCRIPTION="General purpose multiple alignment program for DNA and proteins"
-HOMEPAGE="http://www.clustal.org/"
-SRC_URI="http://www.clustal.org/download/current/${P}.tar.gz"
-
-LICENSE="clustalw"
-SLOT="2"
-KEYWORDS="amd64 x86"
-IUSE=""
-
-src_install() {
-	einstall || die "Installation failed."
-}
diff --git a/sci-biology/clustalw/clustalw-2.0.12.ebuild b/sci-biology/clustalw/clustalw-2.0.12.ebuild
deleted file mode 100644
index 4ea2168b54f7..000000000000
--- a/sci-biology/clustalw/clustalw-2.0.12.ebuild
+++ /dev/null
@@ -1,18 +0,0 @@
-# Copyright 1999-2010 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalw/clustalw-2.0.12.ebuild,v 1.2 2010/01/01 21:32:10 fauli Exp $
-
-EAPI=2
-
-DESCRIPTION="General purpose multiple alignment program for DNA and proteins"
-HOMEPAGE="http://www.clustal.org/"
-SRC_URI="http://www.clustal.org/download/current/${P}.tar.gz"
-
-LICENSE="clustalw"
-SLOT="2"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris"
-IUSE=""
-
-src_install() {
-	einstall || die "Installation failed."
-}