diff options
| author |   Kacper Kowalik <xarthisius@gentoo.org> | 2011-10-20 08:57:30 +0000 |
|---|---|---|
| committer | Kacper Kowalik <xarthisius@gentoo.org> | 2011-10-20 08:57:30 +0000 |
| commit | 907309051e233625985be2e9a7660906d6e91e20 (patch) | |
| tree | 53a3ab6a9dd2bac651444c38272f603f8bd7b93e /sci-biology | |
| parent | Fix SRC_URI (diff) | |
| download | historical-907309051e233625985be2e9a7660906d6e91e20.tar.gz historical-907309051e233625985be2e9a7660906d6e91e20.tar.bz2 historical-907309051e233625985be2e9a7660906d6e91e20.zip | |
Fix SRC_URI for emboss
Package-Manager: portage-2.2.0_alpha69/cvs/Linux x86_64
Diffstat (limited to 'sci-biology')
45 files changed, 135 insertions, 75 deletions
diff --git a/sci-biology/embassy-cbstools/ChangeLog b/sci-biology/embassy-cbstools/ChangeLog index 02016e161abb..8a98140f81ad 100644 --- a/sci-biology/embassy-cbstools/ChangeLog +++ b/sci-biology/embassy-cbstools/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/embassy-cbstools # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-cbstools/ChangeLog,v 1.6 2011/03/13 12:53:41 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-cbstools/ChangeLog,v 1.7 2011/10/20 08:56:48 xarthisius Exp $ + + 20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org> + embassy-cbstools-1.0.0.ebuild, embassy-cbstools-1.0.0-r1.ebuild: + Fix SRC_URI for emboss 13 Mar 2011; Raúl Porcel <armin76@gentoo.org> embassy-cbstools-1.0.0.ebuild, embassy-cbstools-1.0.0-r1.ebuild: diff --git a/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0-r1.ebuild b/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0-r1.ebuild index 70d19e702736..fbf01d165ae7 100644 --- a/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0-r1.ebuild +++ b/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0-r1.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0-r1.ebuild,v 1.3 2011/03/13 12:53:42 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0-r1.ebuild,v 1.4 2011/10/20 08:56:48 xarthisius Exp $ EBOV="6.1.0" inherit embassy DESCRIPTION="EMBOSS wrappers for applications from the CBS group" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos" diff --git a/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0.ebuild b/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0.ebuild index d94032c4fb4e..a68c922ce4e4 100644 --- a/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0.ebuild +++ b/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0.ebuild,v 1.3 2011/03/13 12:53:41 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-cbstools/embassy-cbstools-1.0.0.ebuild,v 1.4 2011/10/20 08:56:48 xarthisius Exp $ EBOV="6.0.1" inherit embassy DESCRIPTION="EMBOSS wrappers for applications from the CBS group" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="amd64 ~ppc x86" diff --git a/sci-biology/embassy-domainatrix/ChangeLog b/sci-biology/embassy-domainatrix/ChangeLog index 3a44c40f6c5a..48d4eb4612e0 100644 --- a/sci-biology/embassy-domainatrix/ChangeLog +++ b/sci-biology/embassy-domainatrix/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/embassy-domainatrix # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domainatrix/ChangeLog,v 1.31 2011/04/05 06:05:10 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domainatrix/ChangeLog,v 1.32 2011/10/20 08:57:09 xarthisius Exp $ + + 20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org> + embassy-domainatrix-0.1.0-r3.ebuild, embassy-domainatrix-0.1.0-r4.ebuild: + Fix SRC_URI for emboss 05 Apr 2011; Justin Lecher <jlec@gentoo.org> -embassy-domainatrix-0.1.0-r1.ebuild: diff --git a/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r3.ebuild b/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r3.ebuild index 72683765dd37..806b2e6c5d87 100644 --- a/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r3.ebuild +++ b/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r3.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r3.ebuild,v 1.3 2011/03/13 12:54:09 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r3.ebuild,v 1.4 2011/10/20 08:57:09 xarthisius Exp $ EBOV="6.0.1" inherit embassy DESCRIPTION="Protein domain analysis add-on package for EMBOSS" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="amd64 ~ppc x86" diff --git a/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r4.ebuild b/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r4.ebuild index dd10a71107f3..970f98c5c5bf 100644 --- a/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r4.ebuild +++ b/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r4.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r4.ebuild,v 1.3 2011/03/13 12:54:09 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domainatrix/embassy-domainatrix-0.1.0-r4.ebuild,v 1.4 2011/10/20 08:57:09 xarthisius Exp $ EBOV="6.1.0" inherit embassy DESCRIPTION="Protein domain analysis add-on package for EMBOSS" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos" diff --git a/sci-biology/embassy-domalign/ChangeLog b/sci-biology/embassy-domalign/ChangeLog index 9a4d1ba64cb0..fd9e26234760 100644 --- a/sci-biology/embassy-domalign/ChangeLog +++ b/sci-biology/embassy-domalign/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/embassy-domalign # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domalign/ChangeLog,v 1.22 2011/04/05 06:06:01 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domalign/ChangeLog,v 1.23 2011/10/20 08:57:30 xarthisius Exp $ + + 20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org> + embassy-domalign-0.1.0-r4.ebuild, embassy-domalign-0.1.0-r3.ebuild: + Fix SRC_URI for emboss 05 Apr 2011; Justin Lecher <jlec@gentoo.org> -embassy-domalign-0.1.0-r1.ebuild: diff --git a/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r3.ebuild b/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r3.ebuild index 6c9739d790cf..5126e6f7ee90 100644 --- a/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r3.ebuild +++ b/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r3.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r3.ebuild,v 1.3 2011/03/13 12:54:37 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r3.ebuild,v 1.4 2011/10/20 08:57:30 xarthisius Exp $ EBOV="6.0.1" inherit embassy DESCRIPTION="Protein domain alignment add-on package for EMBOSS" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="amd64 ~ppc x86" diff --git a/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r4.ebuild b/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r4.ebuild index 2aa9a8e295d6..30c6fe0aa5e2 100644 --- a/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r4.ebuild +++ b/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r4.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r4.ebuild,v 1.3 2011/03/13 12:54:37 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domalign/embassy-domalign-0.1.0-r4.ebuild,v 1.4 2011/10/20 08:57:30 xarthisius Exp $ EBOV="6.1.0" inherit embassy DESCRIPTION="Protein domain alignment add-on package for EMBOSS" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos" diff --git a/sci-biology/embassy-domsearch/ChangeLog b/sci-biology/embassy-domsearch/ChangeLog index 56f9dff81f6d..414b8c4df291 100644 --- a/sci-biology/embassy-domsearch/ChangeLog +++ b/sci-biology/embassy-domsearch/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/embassy-domsearch # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domsearch/ChangeLog,v 1.21 2011/04/05 06:06:38 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domsearch/ChangeLog,v 1.22 2011/10/20 08:55:04 xarthisius Exp $ + + 20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org> + embassy-domsearch-0.1.0-r4.ebuild, embassy-domsearch-0.1.0-r3.ebuild: + Fix SRC_URI for emboss 05 Apr 2011; Justin Lecher <jlec@gentoo.org> -embassy-domsearch-0.1.0-r1.ebuild: diff --git a/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r3.ebuild b/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r3.ebuild index 51ac241a77f3..c6a3941672bd 100644 --- a/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r3.ebuild +++ b/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r3.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r3.ebuild,v 1.3 2011/03/13 12:55:05 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r3.ebuild,v 1.4 2011/10/20 08:55:04 xarthisius Exp $ EBOV="6.0.1" inherit embassy DESCRIPTION="Protein domain search add-on package for EMBOSS" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="amd64 ~ppc x86" diff --git a/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r4.ebuild b/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r4.ebuild index d0dd95caca23..2915d2ab5fd4 100644 --- a/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r4.ebuild +++ b/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r4.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r4.ebuild,v 1.3 2011/03/13 12:55:05 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-domsearch/embassy-domsearch-0.1.0-r4.ebuild,v 1.4 2011/10/20 08:55:04 xarthisius Exp $ EBOV="6.1.0" inherit embassy DESCRIPTION="Protein domain search add-on package for EMBOSS" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos" diff --git a/sci-biology/embassy-emnu/ChangeLog b/sci-biology/embassy-emnu/ChangeLog index 53fdc551f7f0..c2462e926bc1 100644 --- a/sci-biology/embassy-emnu/ChangeLog +++ b/sci-biology/embassy-emnu/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/embassy-emnu # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-emnu/ChangeLog,v 1.31 2011/04/05 06:06:53 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-emnu/ChangeLog,v 1.32 2011/10/20 08:54:43 xarthisius Exp $ + + 20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org> + embassy-emnu-1.05-r5.ebuild, embassy-emnu-1.05-r6.ebuild: + Fix SRC_URI for emboss 05 Apr 2011; Justin Lecher <jlec@gentoo.org> -embassy-emnu-1.05-r3.ebuild: Dropped old, due to unsatisfied deps diff --git a/sci-biology/embassy-emnu/embassy-emnu-1.05-r5.ebuild b/sci-biology/embassy-emnu/embassy-emnu-1.05-r5.ebuild index 7dddedcf47fa..675d68083817 100644 --- a/sci-biology/embassy-emnu/embassy-emnu-1.05-r5.ebuild +++ b/sci-biology/embassy-emnu/embassy-emnu-1.05-r5.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-emnu/embassy-emnu-1.05-r5.ebuild,v 1.3 2011/03/13 12:55:32 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-emnu/embassy-emnu-1.05-r5.ebuild,v 1.4 2011/10/20 08:54:43 xarthisius Exp $ EBOV="6.0.1" inherit embassy DESCRIPTION="EMBOSS Menu is Not UNIX - Simple menu of EMBOSS applications" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="amd64 ~ppc x86" diff --git a/sci-biology/embassy-emnu/embassy-emnu-1.05-r6.ebuild b/sci-biology/embassy-emnu/embassy-emnu-1.05-r6.ebuild index 0b773e9ca284..ed94730f09c5 100644 --- a/sci-biology/embassy-emnu/embassy-emnu-1.05-r6.ebuild +++ b/sci-biology/embassy-emnu/embassy-emnu-1.05-r6.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-emnu/embassy-emnu-1.05-r6.ebuild,v 1.3 2011/03/13 12:55:32 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-emnu/embassy-emnu-1.05-r6.ebuild,v 1.4 2011/10/20 08:54:43 xarthisius Exp $ EBOV="6.1.0" inherit embassy DESCRIPTION="EMBOSS Menu is Not UNIX - Simple menu of EMBOSS applications" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos" diff --git a/sci-biology/embassy-esim4/ChangeLog b/sci-biology/embassy-esim4/ChangeLog index e6c8b0501c1f..549d86832d6f 100644 --- a/sci-biology/embassy-esim4/ChangeLog +++ b/sci-biology/embassy-esim4/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/embassy-esim4 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-esim4/ChangeLog,v 1.30 2011/04/05 06:07:40 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-esim4/ChangeLog,v 1.31 2011/10/20 08:54:22 xarthisius Exp $ + + 20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org> + embassy-esim4-1.0.0-r6.ebuild, embassy-esim4-1.0.0-r5.ebuild: + Fix SRC_URI for emboss 05 Apr 2011; Justin Lecher <jlec@gentoo.org> -embassy-esim4-1.0.0-r3.ebuild: Dropped old, due to unsatisfied deps diff --git a/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r5.ebuild b/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r5.ebuild index cd49159d4c90..e48a6ed6e3d2 100644 --- a/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r5.ebuild +++ b/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r5.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r5.ebuild,v 1.3 2011/03/13 12:56:00 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r5.ebuild,v 1.4 2011/10/20 08:54:22 xarthisius Exp $ EBOV="6.0.1" inherit embassy DESCRIPTION="EMBOSS integrated version of sim4 - Alignment of cDNA and genomic DNA" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="amd64 ~ppc x86" diff --git a/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r6.ebuild b/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r6.ebuild index 0c6152c49271..9e9c0681c4bc 100644 --- a/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r6.ebuild +++ b/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r6.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r6.ebuild,v 1.3 2011/03/13 12:56:00 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-esim4/embassy-esim4-1.0.0-r6.ebuild,v 1.4 2011/10/20 08:54:22 xarthisius Exp $ EBOV="6.1.0" inherit embassy DESCRIPTION="EMBOSS integrated version of sim4 - Alignment of cDNA and genomic DNA" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos" diff --git a/sci-biology/embassy-hmmer/ChangeLog b/sci-biology/embassy-hmmer/ChangeLog index 5c03ed84aeaf..87fd3a15e63b 100644 --- a/sci-biology/embassy-hmmer/ChangeLog +++ b/sci-biology/embassy-hmmer/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/embassy-hmmer # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-hmmer/ChangeLog,v 1.32 2011/04/05 06:08:57 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-hmmer/ChangeLog,v 1.33 2011/10/20 08:54:01 xarthisius Exp $ + + 20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org> + embassy-hmmer-2.3.2-r3.ebuild, embassy-hmmer-2.3.2-r2.ebuild: + Fix SRC_URI for emboss 05 Apr 2011; Justin Lecher <jlec@gentoo.org> -embassy-hmmer-2.3.2.ebuild: Dropped old, due to unsatisfied deps diff --git a/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r2.ebuild b/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r2.ebuild index 87748b6eb9fe..8e2a2b7bab33 100644 --- a/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r2.ebuild +++ b/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r2.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r2.ebuild,v 1.4 2011/03/13 12:56:27 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r2.ebuild,v 1.5 2011/10/20 08:54:01 xarthisius Exp $ EBOV="6.0.1" inherit embassy DESCRIPTION="EMBOSS wrappers for HMMER - Biological sequence analysis with profile HMMs" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="amd64 ~ppc x86" diff --git a/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r3.ebuild b/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r3.ebuild index a3161435b80c..780bc60e149c 100644 --- a/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r3.ebuild +++ b/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r3.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r3.ebuild,v 1.3 2011/03/13 12:56:27 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-hmmer/embassy-hmmer-2.3.2-r3.ebuild,v 1.4 2011/10/20 08:54:01 xarthisius Exp $ EBOV="6.1.0" inherit embassy DESCRIPTION="EMBOSS wrappers for HMMER - Biological sequence analysis with profile HMMs" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos" diff --git a/sci-biology/embassy-iprscan/ChangeLog b/sci-biology/embassy-iprscan/ChangeLog index d34fca8e683c..d282ee0ce54f 100644 --- a/sci-biology/embassy-iprscan/ChangeLog +++ b/sci-biology/embassy-iprscan/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/embassy-iprscan # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-iprscan/ChangeLog,v 1.6 2011/03/13 12:56:54 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-iprscan/ChangeLog,v 1.7 2011/10/20 08:53:38 xarthisius Exp $ + + 20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org> + embassy-iprscan-4.3.1-r1.ebuild, embassy-iprscan-4.3.1.ebuild: + Fix SRC_URI for emboss 13 Mar 2011; Raúl Porcel <armin76@gentoo.org> embassy-iprscan-4.3.1.ebuild, embassy-iprscan-4.3.1-r1.ebuild: diff --git a/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1-r1.ebuild b/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1-r1.ebuild index 165f3a9672c3..90fb625c093a 100644 --- a/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1-r1.ebuild +++ b/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1-r1.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1-r1.ebuild,v 1.3 2011/03/13 12:56:54 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1-r1.ebuild,v 1.4 2011/10/20 08:53:38 xarthisius Exp $ EBOV="6.1.0" inherit embassy DESCRIPTION="InterProScan motif detection add-on package for EMBOSS" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos" diff --git a/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1.ebuild b/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1.ebuild index d7dff4d5e8bc..3a7c4d7af08f 100644 --- a/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1.ebuild +++ b/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1.ebuild,v 1.3 2011/03/13 12:56:54 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-iprscan/embassy-iprscan-4.3.1.ebuild,v 1.4 2011/10/20 08:53:38 xarthisius Exp $ EBOV="6.0.1" inherit embassy DESCRIPTION="InterProScan motif detection add-on package for EMBOSS" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="amd64 ~ppc x86" diff --git a/sci-biology/embassy-memenew/ChangeLog b/sci-biology/embassy-memenew/ChangeLog index 1a12b710a42c..0a5ca0d253f5 100644 --- a/sci-biology/embassy-memenew/ChangeLog +++ b/sci-biology/embassy-memenew/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/embassy-memenew # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-memenew/ChangeLog,v 1.13 2011/04/05 06:10:02 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-memenew/ChangeLog,v 1.14 2011/10/20 08:53:17 xarthisius Exp $ + + 20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org> + embassy-memenew-0.1.0-r1.ebuild, embassy-memenew-4.0.0.ebuild: + Fix SRC_URI for emboss 05 Apr 2011; Justin Lecher <jlec@gentoo.org> -embassy-memenew-0.1.0.ebuild: Dropped old, due to unsatisfied deps diff --git a/sci-biology/embassy-memenew/embassy-memenew-0.1.0-r1.ebuild b/sci-biology/embassy-memenew/embassy-memenew-0.1.0-r1.ebuild index 7e7851f6b513..40e226cb5b05 100644 --- a/sci-biology/embassy-memenew/embassy-memenew-0.1.0-r1.ebuild +++ b/sci-biology/embassy-memenew/embassy-memenew-0.1.0-r1.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-memenew/embassy-memenew-0.1.0-r1.ebuild,v 1.4 2011/03/13 12:57:21 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-memenew/embassy-memenew-0.1.0-r1.ebuild,v 1.5 2011/10/20 08:53:17 xarthisius Exp $ EBOV="6.0.1" inherit embassy DESCRIPTION="EMBOSS wrappers for MEME - Multiple Em for Motif Elicitation" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="amd64 ~ppc x86" diff --git a/sci-biology/embassy-memenew/embassy-memenew-4.0.0.ebuild b/sci-biology/embassy-memenew/embassy-memenew-4.0.0.ebuild index 906989fc1b87..43d57a4c3b0a 100644 --- a/sci-biology/embassy-memenew/embassy-memenew-4.0.0.ebuild +++ b/sci-biology/embassy-memenew/embassy-memenew-4.0.0.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-memenew/embassy-memenew-4.0.0.ebuild,v 1.3 2011/03/13 12:57:21 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-memenew/embassy-memenew-4.0.0.ebuild,v 1.4 2011/10/20 08:53:17 xarthisius Exp $ EBOV="6.1.0" inherit embassy DESCRIPTION="EMBOSS wrappers for MEME - Multiple Em for Motif Elicitation" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos" diff --git a/sci-biology/embassy-mse/ChangeLog b/sci-biology/embassy-mse/ChangeLog index 4c35dcff11b9..cd6f7078ef0a 100644 --- a/sci-biology/embassy-mse/ChangeLog +++ b/sci-biology/embassy-mse/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/embassy-mse # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-mse/ChangeLog,v 1.37 2011/04/05 06:11:58 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-mse/ChangeLog,v 1.38 2011/10/20 08:52:56 xarthisius Exp $ + + 20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org> + embassy-mse-1.0.0-r6.ebuild, embassy-mse-1.0.0-r7.ebuild: + Fix SRC_URI for emboss 05 Apr 2011; Justin Lecher <jlec@gentoo.org> -embassy-mse-1.0.0-r3.ebuild, -embassy-mse-1.0.0-r4.ebuild: diff --git a/sci-biology/embassy-mse/embassy-mse-1.0.0-r6.ebuild b/sci-biology/embassy-mse/embassy-mse-1.0.0-r6.ebuild index a7ef6ae37e63..6b5a771e21c3 100644 --- a/sci-biology/embassy-mse/embassy-mse-1.0.0-r6.ebuild +++ b/sci-biology/embassy-mse/embassy-mse-1.0.0-r6.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-mse/embassy-mse-1.0.0-r6.ebuild,v 1.3 2011/03/13 12:58:16 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-mse/embassy-mse-1.0.0-r6.ebuild,v 1.4 2011/10/20 08:52:56 xarthisius Exp $ EBOV="6.0.1" inherit embassy DESCRIPTION="EMBOSS integrated version of MSE - Multiple Sequence Screen Editor" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="amd64 ~ppc x86" diff --git a/sci-biology/embassy-mse/embassy-mse-1.0.0-r7.ebuild b/sci-biology/embassy-mse/embassy-mse-1.0.0-r7.ebuild index 66106d966119..ec3c5aa55097 100644 --- a/sci-biology/embassy-mse/embassy-mse-1.0.0-r7.ebuild +++ b/sci-biology/embassy-mse/embassy-mse-1.0.0-r7.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-mse/embassy-mse-1.0.0-r7.ebuild,v 1.3 2011/03/13 12:58:16 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-mse/embassy-mse-1.0.0-r7.ebuild,v 1.4 2011/10/20 08:52:56 xarthisius Exp $ EBOV="6.1.0" inherit embassy DESCRIPTION="EMBOSS integrated version of MSE - Multiple Sequence Screen Editor" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos" diff --git a/sci-biology/embassy-phylipnew/ChangeLog b/sci-biology/embassy-phylipnew/ChangeLog index caea87fffc45..d50f17925693 100644 --- a/sci-biology/embassy-phylipnew/ChangeLog +++ b/sci-biology/embassy-phylipnew/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/embassy-phylipnew # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-phylipnew/ChangeLog,v 1.14 2011/04/05 06:10:57 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-phylipnew/ChangeLog,v 1.15 2011/10/20 08:50:46 xarthisius Exp $ + + 20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org> + embassy-phylipnew-3.68.ebuild, embassy-phylipnew-3.67.ebuild: + Fix SRC_URI for emboss 05 Apr 2011; Justin Lecher <jlec@gentoo.org> -embassy-phylipnew-3.6b.ebuild: Dropped old, due to unsatisfied deps diff --git a/sci-biology/embassy-phylipnew/embassy-phylipnew-3.67.ebuild b/sci-biology/embassy-phylipnew/embassy-phylipnew-3.67.ebuild index b1af62bf4a90..a1cf66933488 100644 --- a/sci-biology/embassy-phylipnew/embassy-phylipnew-3.67.ebuild +++ b/sci-biology/embassy-phylipnew/embassy-phylipnew-3.67.ebuild @@ -1,6 +1,6 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-phylipnew/embassy-phylipnew-3.67.ebuild,v 1.3 2011/03/13 12:58:43 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-phylipnew/embassy-phylipnew-3.67.ebuild,v 1.4 2011/10/20 08:50:46 xarthisius Exp $ EBOV="6.0.1" @@ -8,7 +8,7 @@ inherit embassy DESCRIPTION="EMBOSS integrated version of PHYLIP - The Phylogeny Inference Package" LICENSE="freedist" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="amd64 ~ppc x86" diff --git a/sci-biology/embassy-phylipnew/embassy-phylipnew-3.68.ebuild b/sci-biology/embassy-phylipnew/embassy-phylipnew-3.68.ebuild index 0dc5d212db35..7f797a393ce9 100644 --- a/sci-biology/embassy-phylipnew/embassy-phylipnew-3.68.ebuild +++ b/sci-biology/embassy-phylipnew/embassy-phylipnew-3.68.ebuild @@ -1,6 +1,6 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-phylipnew/embassy-phylipnew-3.68.ebuild,v 1.3 2011/03/13 12:58:43 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-phylipnew/embassy-phylipnew-3.68.ebuild,v 1.4 2011/10/20 08:50:46 xarthisius Exp $ EBOV="6.1.0" @@ -8,7 +8,7 @@ inherit embassy DESCRIPTION="EMBOSS integrated version of PHYLIP - The Phylogeny Inference Package" LICENSE="freedist" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos" diff --git a/sci-biology/embassy-signature/ChangeLog b/sci-biology/embassy-signature/ChangeLog index 791f51d4e0da..d296e07d1e4e 100644 --- a/sci-biology/embassy-signature/ChangeLog +++ b/sci-biology/embassy-signature/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/embassy-signature # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-signature/ChangeLog,v 1.21 2011/04/05 06:09:47 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-signature/ChangeLog,v 1.22 2011/10/20 08:50:16 xarthisius Exp $ + + 20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org> + embassy-signature-0.1.0-r3.ebuild, embassy-signature-0.1.0-r4.ebuild: + Fix SRC_URI for emboss 05 Apr 2011; Justin Lecher <jlec@gentoo.org> -embassy-signature-0.1.0-r1.ebuild: diff --git a/sci-biology/embassy-signature/embassy-signature-0.1.0-r3.ebuild b/sci-biology/embassy-signature/embassy-signature-0.1.0-r3.ebuild index 2b1c90972313..f0f7c11a1b7a 100644 --- a/sci-biology/embassy-signature/embassy-signature-0.1.0-r3.ebuild +++ b/sci-biology/embassy-signature/embassy-signature-0.1.0-r3.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-signature/embassy-signature-0.1.0-r3.ebuild,v 1.3 2011/03/13 12:59:11 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-signature/embassy-signature-0.1.0-r3.ebuild,v 1.4 2011/10/20 08:50:16 xarthisius Exp $ EBOV="6.0.1" inherit embassy DESCRIPTION="Protein signature add-on package for EMBOSS" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="amd64 ~ppc x86" diff --git a/sci-biology/embassy-signature/embassy-signature-0.1.0-r4.ebuild b/sci-biology/embassy-signature/embassy-signature-0.1.0-r4.ebuild index 2081fa9b0977..c977b255fc2c 100644 --- a/sci-biology/embassy-signature/embassy-signature-0.1.0-r4.ebuild +++ b/sci-biology/embassy-signature/embassy-signature-0.1.0-r4.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-signature/embassy-signature-0.1.0-r4.ebuild,v 1.3 2011/03/13 12:59:11 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-signature/embassy-signature-0.1.0-r4.ebuild,v 1.4 2011/10/20 08:50:16 xarthisius Exp $ EBOV="6.1.0" inherit embassy DESCRIPTION="Protein signature add-on package for EMBOSS" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos" diff --git a/sci-biology/embassy-structure/ChangeLog b/sci-biology/embassy-structure/ChangeLog index 8c4e74ec59bf..fa7454dba1a8 100644 --- a/sci-biology/embassy-structure/ChangeLog +++ b/sci-biology/embassy-structure/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/embassy-structure # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-structure/ChangeLog,v 1.21 2011/04/05 06:07:51 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-structure/ChangeLog,v 1.22 2011/10/20 08:49:50 xarthisius Exp $ + + 20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org> + embassy-structure-0.1.0-r4.ebuild, embassy-structure-0.1.0-r3.ebuild: + Fix SRC_URI for emboss 05 Apr 2011; Justin Lecher <jlec@gentoo.org> -embassy-structure-0.1.0-r1.ebuild: diff --git a/sci-biology/embassy-structure/embassy-structure-0.1.0-r3.ebuild b/sci-biology/embassy-structure/embassy-structure-0.1.0-r3.ebuild index 67760b71deb4..747c78cb1234 100644 --- a/sci-biology/embassy-structure/embassy-structure-0.1.0-r3.ebuild +++ b/sci-biology/embassy-structure/embassy-structure-0.1.0-r3.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-structure/embassy-structure-0.1.0-r3.ebuild,v 1.3 2011/03/13 12:59:38 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-structure/embassy-structure-0.1.0-r3.ebuild,v 1.4 2011/10/20 08:49:50 xarthisius Exp $ EBOV="6.0.1" inherit embassy DESCRIPTION="Protein structure add-on package for EMBOSS" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="amd64 ~ppc x86" diff --git a/sci-biology/embassy-structure/embassy-structure-0.1.0-r4.ebuild b/sci-biology/embassy-structure/embassy-structure-0.1.0-r4.ebuild index d6f171206606..9939738081af 100644 --- a/sci-biology/embassy-structure/embassy-structure-0.1.0-r4.ebuild +++ b/sci-biology/embassy-structure/embassy-structure-0.1.0-r4.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-structure/embassy-structure-0.1.0-r4.ebuild,v 1.3 2011/03/13 12:59:38 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-structure/embassy-structure-0.1.0-r4.ebuild,v 1.4 2011/10/20 08:49:50 xarthisius Exp $ EBOV="6.1.0" inherit embassy DESCRIPTION="Protein structure add-on package for EMBOSS" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos" diff --git a/sci-biology/embassy-topo/ChangeLog b/sci-biology/embassy-topo/ChangeLog index 51ad687118a1..c62024a9dab2 100644 --- a/sci-biology/embassy-topo/ChangeLog +++ b/sci-biology/embassy-topo/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/embassy-topo # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-topo/ChangeLog,v 1.31 2011/04/05 06:03:14 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-topo/ChangeLog,v 1.32 2011/10/20 08:49:25 xarthisius Exp $ + + 20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org> + embassy-topo-1.0.0-r5.ebuild, embassy-topo-1.0.0-r6.ebuild: + Fix SRC_URI for emboss 05 Apr 2011; Justin Lecher <jlec@gentoo.org> -embassy-topo-1.0.0-r3.ebuild: Dropped old, due to unsatisfied deps diff --git a/sci-biology/embassy-topo/embassy-topo-1.0.0-r5.ebuild b/sci-biology/embassy-topo/embassy-topo-1.0.0-r5.ebuild index c2b497bdd282..885620b65c48 100644 --- a/sci-biology/embassy-topo/embassy-topo-1.0.0-r5.ebuild +++ b/sci-biology/embassy-topo/embassy-topo-1.0.0-r5.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-topo/embassy-topo-1.0.0-r5.ebuild,v 1.3 2011/03/13 13:00:06 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-topo/embassy-topo-1.0.0-r5.ebuild,v 1.4 2011/10/20 08:49:25 xarthisius Exp $ EBOV="6.0.1" inherit embassy DESCRIPTION="EMBOSS integrated version of TOPO - Transmembrane protein display" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="amd64 ~ppc x86" diff --git a/sci-biology/embassy-topo/embassy-topo-1.0.0-r6.ebuild b/sci-biology/embassy-topo/embassy-topo-1.0.0-r6.ebuild index 2e4e6301b6e4..b25c4f6351ad 100644 --- a/sci-biology/embassy-topo/embassy-topo-1.0.0-r6.ebuild +++ b/sci-biology/embassy-topo/embassy-topo-1.0.0-r6.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-topo/embassy-topo-1.0.0-r6.ebuild,v 1.3 2011/03/13 13:00:06 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-topo/embassy-topo-1.0.0-r6.ebuild,v 1.4 2011/10/20 08:49:25 xarthisius Exp $ EBOV="6.1.0" inherit embassy DESCRIPTION="EMBOSS integrated version of TOPO - Transmembrane protein display" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="~amd64 ~ppc ~x86 ~x86-linux ~ppc-macos" diff --git a/sci-biology/embassy-vienna/ChangeLog b/sci-biology/embassy-vienna/ChangeLog index bc943fad42ec..23c45baf17b9 100644 --- a/sci-biology/embassy-vienna/ChangeLog +++ b/sci-biology/embassy-vienna/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/embassy-vienna # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-vienna/ChangeLog,v 1.9 2011/03/13 13:00:33 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-vienna/ChangeLog,v 1.10 2011/10/20 08:49:03 xarthisius Exp $ + + 20 Oct 2011; Kacper Kowalik <xarthisius@gentoo.org> + embassy-vienna-1.7.2.ebuild, embassy-vienna-1.7.2-r1.ebuild: + Fix SRC_URI for emboss 13 Mar 2011; Raúl Porcel <armin76@gentoo.org> embassy-vienna-1.7.2.ebuild, embassy-vienna-1.7.2-r1.ebuild: diff --git a/sci-biology/embassy-vienna/embassy-vienna-1.7.2-r1.ebuild b/sci-biology/embassy-vienna/embassy-vienna-1.7.2-r1.ebuild index 0bcb66bd05d5..8c71911e4ee4 100644 --- a/sci-biology/embassy-vienna/embassy-vienna-1.7.2-r1.ebuild +++ b/sci-biology/embassy-vienna/embassy-vienna-1.7.2-r1.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-vienna/embassy-vienna-1.7.2-r1.ebuild,v 1.3 2011/03/13 13:00:33 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-vienna/embassy-vienna-1.7.2-r1.ebuild,v 1.4 2011/10/20 08:49:03 xarthisius Exp $ EBOV="6.1.0" inherit embassy DESCRIPTION="EMBOSS integrated version of the Vienna RNA package - RNA folding" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos" diff --git a/sci-biology/embassy-vienna/embassy-vienna-1.7.2.ebuild b/sci-biology/embassy-vienna/embassy-vienna-1.7.2.ebuild index 2c6412ae1dac..042a5c7aa114 100644 --- a/sci-biology/embassy-vienna/embassy-vienna-1.7.2.ebuild +++ b/sci-biology/embassy-vienna/embassy-vienna-1.7.2.ebuild @@ -1,13 +1,13 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-vienna/embassy-vienna-1.7.2.ebuild,v 1.3 2011/03/13 13:00:33 armin76 Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/embassy-vienna/embassy-vienna-1.7.2.ebuild,v 1.4 2011/10/20 08:49:03 xarthisius Exp $ EBOV="6.0.1" inherit embassy DESCRIPTION="EMBOSS integrated version of the Vienna RNA package - RNA folding" -SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${EBOV}.tar.gz +SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/old/${EBOV}/EMBOSS-${EBOV}.tar.gz mirror://gentoo/embassy-${EBOV}-${PN:8}-${PV}.tar.gz" KEYWORDS="amd64 ~ppc x86" |