sci-biology/mcl: Move to EAPI=4

Package-Manager: portage-2.2.0_alpha101/cvs/Linux x86_64

5 files changed, 34 insertions, 31 deletions

diff --git a/sci-biology/gibbs/Manifest b/sci-biology/gibbs/Manifest
index be16ca6cc9c5..a7fe1facd2a6 100644
--- a/sci-biology/gibbs/Manifest
+++ b/sci-biology/gibbs/Manifest
@@ -1,17 +1,15 @@
 -----BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA1
+Hash: SHA512
 
 AUX gibbs-demo 313 RMD160 6c986ae90b15f400884146c4eb3bde9fd05696e9 SHA1 c615f608fd85cb409ffbdacafaa90e46c0d8a26b SHA256 018ea72b23f41bd1b5945a58c4e577fb1274484e624fc8c10f96b23bf3d827b4
 DIST gibbs-3.1.tar.gz 563300 RMD160 063de85a7f1a62bcd63c0838db62cb344ff27abd SHA1 9e6fcddd6036ea0c19259820dcfffa9286cd4e1f SHA256 e8bd62b7d2580b00fc0cdf32ed75ac1ffac29747c75227269a75fd587ba77b69
-DIST gibbs9_95.tar 598016 RMD160 6c0231b523fc8722af8fbc87172552dbe64de385 SHA1 5b3b4a8bf4a7f67d31f86e6dff0054cbcda98481 SHA256 8d358fb29ad79e03aec142837d63ebd4ddce56a38e36d7d91a668ece12fd78de
-EBUILD gibbs-1995.9.ebuild 1190 RMD160 a24b8bf24308dab3f6eb71e5588276394da47c0a SHA1 577e2a4a23fc9a56c935cba457c021b7f755a74d SHA256 fb3b6a1c3bee7cb563e40d4d802400bef4a33be7ba8ec73321fb86ea303cdfc2
-EBUILD gibbs-3.1.ebuild 1116 RMD160 5ef1d0e7578194a2030f13f2c4dea8a98d35ab6f SHA1 e4cca36a0c5b40ce718ae0eae3cd43b1a30f4f5e SHA256 9cc0ee4bbc08a98b1fe525ed530d215b2923e1169fb36a63521ff4f6e45beda7
-MISC ChangeLog 1634 RMD160 053355cc138c5d1fee866c6cd338b3f96fdf7558 SHA1 589f332094344b155c29b9e5568b8ecd3c67e790 SHA256 cf4a816f515197c862ebc88af6e1d76b1548240b5c1c9595748c6c4043fd73ab
+EBUILD gibbs-3.1.ebuild 1187 RMD160 dedbe25c8e427530a10de204230b6a5e06f325dc SHA1 e21f8fccde99b63dccdc123798b55a90f7887733 SHA256 4397ff47dc2c0675c22f53f9c6f0b510ab8bfc54a9243f26965040973231ef9d
+MISC ChangeLog 1749 RMD160 df3ec9812a4d25de66e8ff382f538108b6e70779 SHA1 1211c037ef1291f97ddff2b8550393b0188b72a3 SHA256 b3dd3175ff64335c168eeedbd56c9442d9cdb4fadc70d41b02593e432a0899fb
 MISC metadata.xml 387 RMD160 3c4408949179f2c1d55cc49423d944ce077d3d03 SHA1 d3854dbe74c13d22b3eb6eec2c90720bafb87c50 SHA256 426934f62d87bc1d4135a8f27f06297abfb36321f20ed96f3b32beb7f7a44e27
 -----BEGIN PGP SIGNATURE-----
-Version: GnuPG v2.0.11 (GNU/Linux)
+Version: GnuPG v2.0.19 (GNU/Linux)
 
-iEYEARECAAYFAks5Q/QACgkQkKaRLQcq0GIJHgCbBLOWErZhP/P2BnAxmjy6KdCk
-g1IAni94ulrNUzOE1KUHi/BmgVIQ3gzf
-=30hD
+iEYEAREKAAYFAk+ZdQoACgkQgAnW8HDreRY3GQCgi97v4mhfiB7esQathK1i30vH
+9MMAn3qV4jRgGqz6u6n3IyQX1PMnjzlX
+=qsYg
 -----END PGP SIGNATURE-----
diff --git a/sci-biology/mcl/ChangeLog b/sci-biology/mcl/ChangeLog
index d96edde8035c..b996cc4434a4 100644
--- a/sci-biology/mcl/ChangeLog
+++ b/sci-biology/mcl/ChangeLog
@@ -1,6 +1,9 @@
 # ChangeLog for sci-biology/mcl
-# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/mcl/ChangeLog,v 1.1 2009/04/05 00:27:43 weaver Exp $
+# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/mcl/ChangeLog,v 1.2 2012/04/26 16:17:02 jlec Exp $
+
+  26 Apr 2012; Justin Lecher <jlec@gentoo.org> mcl-08.312.ebuild, metadata.xml:
+  Move to EAPI=4
 
 *mcl-08.312 (04 Apr 2009)
 
diff --git a/sci-biology/mcl/Manifest b/sci-biology/mcl/Manifest
index 76a543dc4b90..0ee70b492c3a 100644
--- a/sci-biology/mcl/Manifest
+++ b/sci-biology/mcl/Manifest
@@ -1,4 +1,14 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA512
+
 DIST mcl-08-312.tar.gz 2749006 RMD160 9148ede55ae8b0bbc73e8afd6f6babbe1623cfa3 SHA1 c1ed9c1b73d31b0e896d33c30f94e1e6a59b2a01 SHA256 0061da0661e99f783d97e6ae10149fe5ce11fa332b24cc8a4a491a072867bb6e
-EBUILD mcl-08.312.ebuild 623 RMD160 4d643dba3944552d0a102cff90a07d9927b38039 SHA1 4e4f4bc2301ca4c900e82fed8aafc0c755b5f88c SHA256 8904ce6e934ecc7b83438b98edc7a4033ef6a741099d5a7e499c07c9f6646ae3
-MISC ChangeLog 466 RMD160 e4a4b4f168862a28b8112d3b3acf08c92e9be058 SHA1 3c1784e41825f289ab0fb2402e67f9ac3b9c4805 SHA256 5f051f14d48e1c875744f4582d46ace35034cfd7e946147274cfd582e1b5a35d
-MISC metadata.xml 336 RMD160 0586e0f2dd2613aaffcdcf9399f33a4ca508bffd SHA1 435334e7348cdd4289021e4a85397b26faa4eabd SHA256 70eba044c1e004cb32570d7939bcd6d192df6ba5a0dfcc3ef3f8b1774f73d108
+EBUILD mcl-08.312.ebuild 522 RMD160 4b08495e5b497933bae8fbeab8d8f35ec5574603 SHA1 7887ee11df8b5a098ce2e5c6f6220cebc6a7a8df SHA256 d56b502eef40c4727471c92f6589a9d6f6c782cc55a4b65db18424a5386d3992
+MISC ChangeLog 562 RMD160 02581724e4739014e18cf5d60e08c8819bb7ca4f SHA1 b3acdb3e65eac2dc38f1d3ef7b40ea80fdffa424 SHA256 de2703ebfc6ddf2ed3c8e8c0b15e2b819cdd97257abdf38e15d78378847c739b
+MISC metadata.xml 339 RMD160 aa4bbb5077c170cc7a34e463310f57e9e1b17af6 SHA1 8a4bf6651bf0803442811120f7a8681217a92592 SHA256 7f3f3ca893beb3cda62123f9c2e5262df92e6e122b6f69f95ff84ce79fa4f1f8
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v2.0.19 (GNU/Linux)
+
+iEYEAREKAAYFAk+ZdQMACgkQgAnW8HDreRZEXgCgzhNOUR83rjZxJnqJ45QkuFca
+ctMAoJfYDO+JRKrMw/v2IJsg64imbQtd
+=rZRX
+-----END PGP SIGNATURE-----
diff --git a/sci-biology/mcl/mcl-08.312.ebuild b/sci-biology/mcl/mcl-08.312.ebuild
index 18639d98013e..894768dd474a 100644
--- a/sci-biology/mcl/mcl-08.312.ebuild
+++ b/sci-biology/mcl/mcl-08.312.ebuild
@@ -1,8 +1,8 @@
-# Copyright 1999-2009 Gentoo Foundation
+# Copyright 1999-2012 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/mcl/mcl-08.312.ebuild,v 1.1 2009/04/05 00:27:43 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/mcl/mcl-08.312.ebuild,v 1.2 2012/04/26 16:17:02 jlec Exp $
 
-EAPI="1"
+EAPI=4
 
 MY_P="${PN}-${PV/./-}"
 
@@ -12,19 +12,11 @@ SRC_URI="http://micans.org/mcl/src/${MY_P}.tar.gz"
 
 LICENSE="GPL-2"
 SLOT="0"
-IUSE="+blast"
 KEYWORDS="~amd64 ~x86"
-
-DEPEND=""
-RDEPEND=""
+IUSE="+blast"
 
 S="${WORKDIR}/${MY_P}"
 
-src_compile() {
-	econf $(use_enable blast) || die
-	emake || die
-}
-
-src_install() {
-	emake DESTDIR="${D}" install || die
+src_configure() {
+	econf $(use_enable blast)
 }
diff --git a/sci-biology/mcl/metadata.xml b/sci-biology/mcl/metadata.xml
index c042ab993df2..d84c4cd65102 100644
--- a/sci-biology/mcl/metadata.xml
+++ b/sci-biology/mcl/metadata.xml
@@ -6,9 +6,9 @@
 		<name>Andrey Kislyuk</name>
 	</maintainer>
 	<herd>sci-biology</herd>
-<use>
-	<flag name='blast'>
+	<use>
+		<flag name="blast">
 		add support for NCBI BLAST data
 	</flag>
-</use>
+	</use>
 </pkgmetadata>