sci-physics/root: Merge changes from sci overlay

Package-Manager: portage-2.2.7/cvs/Linux x86_64
Manifest-Sign-Key: 0xB9D4F231BD1558AB!

4 files changed, 478 insertions, 27 deletions

diff --git a/sci-physics/root/ChangeLog b/sci-physics/root/ChangeLog
index eba237eb7813..553b118b3ee8 100644
--- a/sci-physics/root/ChangeLog
+++ b/sci-physics/root/ChangeLog
@@ -1,6 +1,17 @@
 # ChangeLog for sci-physics/root
 # Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-physics/root/ChangeLog,v 1.125 2013/12/05 17:34:12 bicatali Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-physics/root/ChangeLog,v 1.126 2013/12/10 16:41:01 jlec Exp $
+
+*root-5.34.13-r1 (10 Dec 2013)
+
+  10 Dec 2013; Justin Lecher <jlec@gentoo.org> +root-5.34.13-r1.ebuild,
+  metadata.xml:
+  Merge changes from sci overlay
+
+  10 Dec 2013; Andrew Savchenko <bircoph@gmail.com> -root-5.34.10-r2.ebuild,
+  root-5.34.13.ebuild, -files/root-5.28.00b-unuran.patch:
+  Add ROOTPrimer and Spectrum user guides.
+  Remove old versions.
 
 *root-5.34.13 (05 Dec 2013)
 
diff --git a/sci-physics/root/Manifest b/sci-physics/root/Manifest
index b04c1673781c..ffd73ca38eac 100644
--- a/sci-physics/root/Manifest
+++ b/sci-physics/root/Manifest
@@ -1,5 +1,5 @@
 -----BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA256
+Hash: SHA512
 
 AUX proofd.confd 415 SHA256 261738817b4ba50fb07007741305d0a88e9067a45e3cbfd1d3fc8bebe70ece38 SHA512 5aa6e6313cf159d2b407286a15f7f959d966a7e9b74bd2a74f13bd3fe01c04d99b46b5fb55f4a7434ebe911cd8b6469657d96591d624a7bfc7d39d49ab62b900 WHIRLPOOL 4a0604d8827cd733a2f5b34183bfd9458aff94f036f9177f2de3283da7722cf2e6dbf6acae93fe3ccd8144ad646c283458550f97f357148cc9f903c7469c57ca
 AUX proofd.initd 717 SHA256 f60fa92173370e237e3e2cf5be7add5aa63752e3b7496cf3a0a5acc1dc927ebc SHA512 73db660c9a3ab8e9a1e1794c7a54ffff3c9c25b9aa0b8273e24c7dcdcb6ac60824a8782087529834d1c4316c1166178ac39daa0feda2971784cc3115bba2a30f WHIRLPOOL 491ccca22cf08d9dc2f61fc6e4cf1fa00c8ad995ce20e7e94cd3b1ea5438568dc23e31a01ae98ea4431aa351c4983c77b26baa3052b42a9747e84c5413cb2be9
@@ -21,6 +21,8 @@ AUX root-5.34.13-pythia8.patch 624 SHA256 89d4bd908b7af99ed7826a9344ce85a2d0d1f9
 AUX root-5.34.13-unuran.patch 1555 SHA256 279c7f4495ddbd508ac6f2e9fff53d65fc6e623997d1fbe917c4e6a8adb627e8 SHA512 571d6bd56d2419e4b96f7ca95d14d291768cc98024f871ca35bfae1a7d1e010a7c101f927c66ece4c006ca89401aeaea89945b8502f1ae2b2068f535d0bc95f3 WHIRLPOOL cb1b889e0d35a0d1f0969491c8909eb62ef931dd9d2f76e93cefab2cd9cb9a5aeb79337ba124089a45c069a75b936b9225d2e8909be751f0b8d6ed87063dac79
 AUX rootd.confd 199 SHA256 7b69f646ce0b2546ce797ec4a05949b02302dc5f4e41d2e8896ed0bc6575ac8d SHA512 2ce6753d37a7f22cc3656f110f802b8e07c1469bfe4524606c1472369352f8c584c01c716760252fab40369470b72d8c77cdbb2d52126c39371faaf597bf58d8 WHIRLPOOL b4c65e5026d6583775cda7b13fdbc5ae48c82c36710efbdd6b112243310090c05b5726d6e76d1ae25d585ecaa4aec4a5059336bf54135bafd0e4a921db468742
 AUX rootd.initd 732 SHA256 42b9fe01aa41965359c16d4b23f874cea65806d8c7ec11215dbba95ab80e90f3 SHA512 65152830554ed509db7e5545bffb4976a608ee576d62ac648fc5520ff96ea5062c9b20c195dad2cf8dc2b34079e6beb252d427030825e14dc867ae4599bc64b8 WHIRLPOOL ec03db863e079b3f910ec0f86b036a828b2a5804f6bd6e0398e5207000f1ca10b6b1e71504d6c6b3a2d216b20d7db27d2425070f9d6bb0696ef384dfe8526fc0
+DIST ROOTPrimer-5.34.13.pdf 2308794 SHA256 39cd18fac66b2de4e829aaffb819b43b11579b38ffb2e45b12e8216f8457c74f SHA512 95e5c7af8a949d842a19d71b97de6f2c6a0e866a4f786e008303cd25bbaab5d658ded299bd667788d3ba462c30b0fda321327b53a4f50352360d1cf51a39ef57 WHIRLPOOL ad534bdfbaf45a574e67b0c1ee9be5e8931dfee87963bbe4c89cd7a39a1baa5f3e72991df656513303c1553e72933bad02e41172a2c8bcad3e8a9a23f6181e22
+DIST ROOTPrimerLetter-5.34.13.pdf 2310846 SHA256 b12ae7e21a084ba847337bfb4e3fbcb784d98a67178d87c399eeea0369580b93 SHA512 96012a25d0f9d408f3310aa2949db9027e8e8b8768298d83b719963628806022e570842fa3a6927eb77c7d81957842684b93fa02a5652a74037b1f44c9c72449 WHIRLPOOL 451b5f3b4c3abb2292a45a8546353245efedc7d1293e6179cd1a7ea9544d4cb08e075629b2930994fe31c20695bf1c4ed1773e37b4e6ccf684dc8317cc464782
 DIST ROOTUsersGuide.pdf 9124822 SHA256 70a96c4a2573dc0d320142f86993ecfda24caa755e910340a3014120f2997c8b SHA512 c3b4c18ef2e13968afdf67c6003249d4cfe6ea661fa32ce25127361bae7e3376a25cd3b11591292f3975bcd8105291aca52f2f6214c9fe45f4bd6e7e44d54b25 WHIRLPOOL 11256ba7837d17e5795cf71ac32db43d7d8f797bfbddf5f71612fe2f8fb2e01354372c0ea8f0bc22868881eb0bfdc8a3e3f1b05293d2750d293aa4d59217b2e6
 DIST ROOTUsersGuideA4-5.34.09.pdf 11180089 SHA256 2284c74256bb2e4c2b549525849806ad73a910ad6c52d1424cba922109f7acbf SHA512 eb4371ea992cccbd176be8616dac2a0c9c02c9fa102736fe025bcdb6e5bcf485483bf4e290d2586d48be1a38b02d76c6ac1c422c272c7a1aab5a3e07d8d0a2cf WHIRLPOOL 7915378699d445dc3965d47a2f911bd2e0b3fd3c89934127dcfba8b64ae80cdb5d44776e14f64b28b58adc22557abbd860bf303f39af27a9f02bc5963b5bc672
 DIST ROOTUsersGuideA4-5.34.10.pdf 11182577 SHA256 f1fecb8620480e4d3a2657597e0c27ff492b438da5e7fbd51c66a3c7ac502cc8 SHA512 559bd0cc17fc3d72335aa4d6c7dde32cef9617065504477a6ea2a13fc2e41a771149568ac7ba2eac212548b735f9eba3a6175455b92c599ae80975992e1d74c3 WHIRLPOOL ce22b084860096cf4db6bdb4e14f10442fa21d7c6ad1f5526f7caef3d7e4775417c1a731b090214681b51ba4377387777547ca9dee893f096a2635a477f7eb09
@@ -29,6 +31,8 @@ DIST ROOTUsersGuideLetter-5.34.09.pdf 11197119 SHA256 f9d7d650c5c22e10ce834a43a4
 DIST ROOTUsersGuideLetter-5.34.10.pdf 11200245 SHA256 8eb972b3701e5fe1757a15974a73c26ff4555a848c7eed242d32a0df3a24b091 SHA512 89e9ff73907c26c5a0008acdeb2a07297d42b74ce8d4fb1d0ebdb22be89ebcffc631f501ff7a438a3d5c992221c05e9941996db63e23301dcb16c91d02a94522 WHIRLPOOL e0f13f05fa9d42e22a491d821380547cbf7cdcc5b2f7223192a82abe3f8b7509c1ab80c47f7da9c70afb7084991d33015cab649fcaa46891933e56630f87f397
 DIST ROOTUsersGuideLetter-5.34.13.pdf 11200245 SHA256 8eb972b3701e5fe1757a15974a73c26ff4555a848c7eed242d32a0df3a24b091 SHA512 89e9ff73907c26c5a0008acdeb2a07297d42b74ce8d4fb1d0ebdb22be89ebcffc631f501ff7a438a3d5c992221c05e9941996db63e23301dcb16c91d02a94522 WHIRLPOOL e0f13f05fa9d42e22a491d821380547cbf7cdcc5b2f7223192a82abe3f8b7509c1ab80c47f7da9c70afb7084991d33015cab649fcaa46891933e56630f87f397
 DIST RooFit_Users_Manual_2.91-33.pdf 1330062 SHA256 101c4e4c41962238fcabf1caa86cafc51241a1800594491b2e62ef8b565a5646 SHA512 732d7dea3541b51e5f0b9b5b70dae57e1bdbb2504c4222d5e5095ec0f9b67307011c1f31c2c95be419b53dd8426f52f62f6c9370084208176a2ed3d7f25d783b WHIRLPOOL 033897bef4bdb13246a81ea6749f7895e6c4d639752e932130234ad9153bb399a4e5d416237850da27f139d3cccc53d9adb7a077abf20d257ce057157d6c3696
+DIST Spectrum-5.34.13.pdf 4467779 SHA256 9c77554d528835934a997f8c2c64f2c6ddf39790fc5484cebd612e1d6323cb04 SHA512 ae85e2d796ce35c92e9c9243eb19b06a68276e1dc91782e4eb125a68a61612ec4034842374bbd725e59eb78fb93ed88f8d6848a51c813575cecccb94904b45e8 WHIRLPOOL 4478450e5576bfed73e423f2f0d23b6d51acb120faad9b6cc9e5eeed845130565bfa8b32a67b6dad517a2551ff318473d1476b4df372c0ed0cbacf726984f6fd
+DIST SpectrumLetter-5.34.13.pdf 4470679 SHA256 d5aaecdc2e1498e89d1f4ef7bafb3a207ee4440dc8bc15e8de599d603ee66638 SHA512 410f028fc2dc93ae26b72562821c121b4ab6103f9ee91c6e5a6094c7b452cea6885dc16f3cb1b8eb3430ea2aadf41a9864a71a6b79aa14ea6cbc4cc35bb24b1b WHIRLPOOL 18ea25aaa219b972677f7ff1ab41a0bb816b0059012f1617931e0dacae9adfb62940b8ad1346e28e4eb2f9c86f501dc884022230655d911c007da0e8986e9352
 DIST TMVAUsersGuide-v4.03.pdf 3913533 SHA256 0cdbb4a2d19eb7a86e2911cfa73a905932e862d6c94be10b7662a9355b0241af SHA512 d8bb2ce35ef32c4877059898f56513db0b1057924e21935a3d3a6f114748e167984c43fd2ec7e54197fccff875540543968fea9a8e75bf63f5f13521724a7ddb WHIRLPOOL 0a3e2e61e8e32f3a22757178adf033f9fbb89014aecd4df7f8bd49677d772bb3ad2c0f5526259611879f6bb20df647c01e23f53ade483d7a3e2242f8aee6c6aa
 DIST info.png 2060 SHA256 51de6661250f3fb71c6c8250cbc4bdc4dc4283cc90240b4dc1ee6168e8d40279 SHA512 81a730eefbe7a7e15d5840491402c7644bf7ed5d5f8f3830ed9457b343cc7882480e993ea84aef93500742cd0fe8469859cd2c925e5582b91ef56406804ae276 WHIRLPOOL 02ea6daf9e3d21947ebf5dd01c455a13f2fcbf9981be34a150056a3510122ca49e3d137d4f242c7218d4d06ace09566d513a04f09071723ac244f5a38e982bac
 DIST root-banner.png 132555 SHA256 d165e1cc175f654ff79af39193a6144678f600e14a53dd20e2b216b3e8951e94 SHA512 139347f396e88c8062d847d612949204cb80e551a826d926950ca8ab967f0d496487fed17a227fc796ae4db23fca758d91a0af7943142adbed358e98d7667b1f WHIRLPOOL dd23e26acf9303b404cda8135d6946af3b1abba3dfdff8d80e56096f810d50a01ebfb52dc1e6ee1d1b99fbb5859dc850e0e368155339b5007294d95ce8909857
@@ -42,13 +46,24 @@ EBUILD root-5.32.03-r2.ebuild 11352 SHA256 8284393d3b88aac2ee950aca43de30d0f62c1
 EBUILD root-5.32.04.ebuild 11351 SHA256 b31258ba2d6f2787f1e2b8e0b0c956ed3ac3169a6b63fc14ac89ad490fce6a35 SHA512 1aac1598858ab3f23599dd403a278438f32390c756b6a8c97752e1a942b7986a91d767a17998abe5673bef77dada10274dc7f489347d5a5a38c51a54b45f328f WHIRLPOOL db527445495b93a4be6c350cab03c014047ada143a5b2892fd8230fc2b826099378a6b8398619b753be0c948e8350766e8fe86b00e2b9b9e7d3e2dab03ff19f6
 EBUILD root-5.34.09.ebuild 11673 SHA256 628ca1a69fd97448a40d32a0acfa0afbd85694d758dc9433560420349ced495c SHA512 d1782da829579be169a78438ea940bddd7ead34670e8e43f9e3c423caf28f9a9ecb6d4cb1693eb7caa283ea688ede815505a66687d02d41a6439bb4f0297892f WHIRLPOOL 32c9d4708535197c60c1c42ec6f612ad71979a87fb631e99373883c79b6aedc1cd0bb9df28c20dd5be280e22f3e39a024606ba3bfbcef8922161a160232151c1
 EBUILD root-5.34.10-r2.ebuild 12264 SHA256 71b545d69991ba55b2d232cdfc873d5836aff8e1e2dc1f5f54b568352a7fffd9 SHA512 2d51c1384f702d8d2d3a77c3976162228563ee4a3c8d0bc3f91a485a6e9e2d1b79fd5ced6f65dc6ca4afb606e2ceb27b727ea76ae1148aa6272125ea506946dd WHIRLPOOL bf294e3201869febae2ec84d83c957f9c29b7bddffa692f6c51c338091daafc3cd7846c761059efb9fc4595958c552d27ec1166dc39679f0c8d3d93c5d22c602
+EBUILD root-5.34.13-r1.ebuild 12967 SHA256 244cfcf16b3968b6794ba1035351059d8b1ed9617829403e6c00d80d66e72a07 SHA512 c5cd6dcbde6f98251d9e60beb65828f9ff857d1f5fcac423b20a1c2afbfa9f6bccf97921b44a92e25565c82a815fa7fbf8e549486e2a2dd702c3904c46afb7aa WHIRLPOOL 3a8748652af96b48607d17f8679683b7b512101745d1e068b285b5c0a5b24b3d4231afff1612d85e421a7c9e27fcb4c3d496e382630ee712bde0fd3c094154ae
 EBUILD root-5.34.13.ebuild 12389 SHA256 1ccbfa27c69c4493edaca6b492004033372b42811b8bfdb5087b590756ef34fc SHA512 e22598c353c9e29f8841e039e490bd58f6cec50c29f84875854eca26399967d225eeff4d9b16586865e97ae8a1226201a7818514a0851050c683bf175c3b8a7b WHIRLPOOL 56624eb96c20a123ffaba5263a6c5d37e4e3da683a1d1ae7afb449f193f01d25a93a1a4b296aac0275b686dc27c6849071e0787070961764dec88617c042c985
-MISC ChangeLog 38233 SHA256 01352caae7589d891ce22165bcf83c255f2081d8c64bd4f380f0ce7142632673 SHA512 bec8445af0dace8c7f46f9c4e71e949d7b68f2d1e7ac81f3cfd5caed2a4f0c216e5d816c619714b4fb26c378b25c37c9cbb7eadf6b88dcd81c739fd00c44b2d2 WHIRLPOOL d5fcf0a3aff505d0f3a1889856a80fa536c427471a764219721aecc0120019b55ea2b5f217c31920258a6f70ea16b603da8385ce14c22ebd0f04582d18af45fe
-MISC metadata.xml 1719 SHA256 7b5eda9813292066484d4d7a5741c6122f7259cf7a6ca37aa7d22219badc9c8f SHA512 f195395b8ba421c945678d54823d021779610e06e4f2af0e45a4c4a54a4f5c71e6d73feecafdc2b729a6149b5618a47ff9b334386c31c3547be7ede1638cb4e2 WHIRLPOOL 9728d7b6fe2a6da41168fb812d35c13278a5c8daaa611e94f971617f07bcb5edefa9cea852e2d6c885b896c494541c7152c04efafe5d172456049f945c128da4
+MISC ChangeLog 38585 SHA256 83ac6b1aa97d4eb426604ad1a940318380908e4a932aef81593e25ecd394a013 SHA512 9c14f8f8916d4945d4f87becd4338405224e3a108a42123c3330818efd3ff63704f7835c4ae0aa71e538a14b658fa2c7d7f36744ba40dba033dd459f6b139198 WHIRLPOOL 9473e7970b09417c852d7fae71efd7ebc2ac233b7703d1bba17f906470dfaf6f25a6f4299cfe80aa67b36bdc8ccfde886e881521f079cdb92127333bb1320e76
+MISC metadata.xml 1759 SHA256 55a9b085adeecc64f5a7231c5f11a00fab2cd0e49d4b4e3b703d2d2521bb6623 SHA512 b22d39921148e0f42b55f586e6d362c5988ca0db63141b375c2419766a0a38c6c92e6920496da7310c8d5b6e663e190e88ff168e393b5a8c809b482141154f50 WHIRLPOOL 09d214da7bdd6b3c3fe004d7bb4d934dac01893f7a83582946ea39762bf791bd1698e493daeac37a2134bd880d340dc8124e842e8b9e1fb65b6a7e0ad64e1d67
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diff --git a/sci-physics/root/metadata.xml b/sci-physics/root/metadata.xml
index c4e415433298..bdcb7471a9dd 100644
--- a/sci-physics/root/metadata.xml
+++ b/sci-physics/root/metadata.xml
@@ -1,14 +1,14 @@
 <?xml version="1.0" encoding="UTF-8"?>
 <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
 <pkgmetadata>
-<maintainer>
-  <email>bircoph@gmail.com</email>
-  <name>Andrew Savchenko</name>
-  <description>Maintainer. Assign bugs to him</description>
-</maintainer>
-<herd>sci-physics</herd>
-<herd>proxy-maintainers</herd>
-<longdescription lang="en">
+  <maintainer>
+    <email>bircoph@gmail.com</email>
+    <name>Andrew Savchenko</name>
+    <description>Maintainer. Assign bugs to him</description>
+  </maintainer>
+  <herd>sci-physics</herd>
+  <herd>proxy-maintainers</herd>
+  <longdescription lang="en">
   ROOT Object Oriented Technologies is an object oriented data
   analysis framework written in C++ by the CERN. Widely used in
   high energy physics, but also in other data analysis applications. It
@@ -16,16 +16,16 @@
   statistics, serialization, optimization, linear algebra, graphics,
   GUI toolkit, and a complete visualization framework.
 </longdescription>
-<use>
-  <flag name="c++0x"> Build ROOT using the C++11 standard. Not supported, requires <pkg>sys-devel/gcc</pkg>&gt;=4.7.0</flag>
-  <flag name="clarens"> Build the Clarens and PEAC plug-ins, to use in a GRID enabled analysis</flag>
-  <flag name="fits">Support for images and data from FITS files with <pkg>sci-libs/cfitsio</pkg></flag>
-  <flag name="htmldoc">Generate html documentation</flag>
-  <flag name="math">Build all math related libraries plugins, needs <pkg>sci-libs/gsl</pkg> </flag>
-  <flag name="metric">Default to A4 paper size and metric measurement</flag>
-  <flag name="pythia6">Build the interface for <pkg>sci-physics/pythia</pkg> version 6.x </flag>
-  <flag name="pythia8">Build the interface for <pkg>sci-physics/pythia</pkg> version 8.x </flag>
-  <flag name="reflex">Build the reflection database for the C++ interpreter</flag>
-  <flag name="xrootd">Build the interface for <pkg>net-libs/xrootd</pkg> </flag>
-</use>
+  <use>
+    <flag name="c++0x"> Build ROOT using the C++11 standard. Not supported, requires <pkg>sys-devel/gcc</pkg>&gt;=4.7.0</flag>
+    <flag name="clarens"> Build the Clarens and PEAC plug-ins, to use in a GRID enabled analysis</flag>
+    <flag name="fits">Support for images and data from FITS files with <pkg>sci-libs/cfitsio</pkg></flag>
+    <flag name="htmldoc">Generate html documentation</flag>
+    <flag name="math">Build all math related libraries plugins, needs <pkg>sci-libs/gsl</pkg> </flag>
+    <flag name="metric">Default to A4 paper size and metric measurement</flag>
+    <flag name="pythia6">Build the interface for <pkg>sci-physics/pythia</pkg> version 6.x </flag>
+    <flag name="pythia8">Build the interface for <pkg>sci-physics/pythia</pkg> version 8.x </flag>
+    <flag name="reflex">Build the reflection database for the C++ interpreter</flag>
+    <flag name="xrootd">Build the interface for <pkg>net-libs/xrootd</pkg> </flag>
+  </use>
 </pkgmetadata>
diff --git a/sci-physics/root/root-5.34.13-r1.ebuild b/sci-physics/root/root-5.34.13-r1.ebuild
new file mode 100644
index 000000000000..12a1521a10f6
--- /dev/null
+++ b/sci-physics/root/root-5.34.13-r1.ebuild
@@ -0,0 +1,425 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-physics/root/root-5.34.13-r1.ebuild,v 1.1 2013/12/10 16:41:01 jlec Exp $
+
+EAPI=5
+
+if [[ ${PV} == "9999" ]] ; then
+	_GIT=git-2
+	EGIT_REPO_URI="http://root.cern.ch/git/root.git"
+	SRC_URI=""
+	KEYWORDS=""
+else
+	SRC_URI="ftp://root.cern.ch/${PN}/${PN}_v${PV}.source.tar.gz"
+	KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+fi
+
+PYTHON_COMPAT=( python2_{6,7} )
+inherit elisp-common eutils fdo-mime fortran-2 ${_GIT} multilib python-single-r1 toolchain-funcs user versionator
+
+ROOFIT_DOC_PV=2.91-33
+TMVA_DOC_PV=4.03
+PATCH_PV=5.28.00b
+PATCH_PV2=5.32.00
+PATCH_PV3=5.34.05
+PATCH_PV4=5.34.13
+
+DESCRIPTION="C++ data analysis framework and interpreter from CERN"
+HOMEPAGE="http://root.cern.ch/"
+SRC_URI="${SRC_URI}
+	!minimal? ( doc? (
+		math? (
+			ftp://root.cern.ch/${PN}/doc/RooFit_Users_Manual_${ROOFIT_DOC_PV}.pdf
+			http://tmva.sourceforge.net/docu/TMVAUsersGuide.pdf -> TMVAUsersGuide-v${TMVA_DOC_PV}.pdf
+			metric? ( ftp://root.cern.ch/root/doc/spectrum/Spectrum.pdf -> Spectrum-${PV}.pdf )
+			!metric? ( ftp://root.cern.ch/root/doc/spectrum/SpectrumLetter.pdf -> SpectrumLetter-${PV}.pdf )
+		)
+		metric? (
+			ftp://root.cern.ch/${PN}/doc/ROOTUsersGuideA4.pdf -> ROOTUsersGuideA4-${PV}.pdf
+			ftp://root.cern.ch/root/doc/primer/ROOTPrimer.pdf -> ROOTPrimer-${PV}.pdf )
+		!metric? (
+			ftp://root.cern.ch/${PN}/doc/ROOTUsersGuideLetter.pdf -> ROOTUsersGuideLetter-${PV}.pdf
+			ftp://root.cern.ch/root/doc/primer/ROOTPrimerLetter.pdf -> ROOTPrimerLetter-${PV}.pdf )
+		htmldoc? (
+			http://root.cern.ch/drupal/sites/default/files/rootdrawing-logo.png
+			http://root.cern.ch/drupal/sites/all/themes/newsflash/images/blue/root-banner.png
+			http://root.cern.ch/drupal/sites/all/themes/newsflash/images/info.png )
+	) )"
+
+SLOT="0"
+LICENSE="LGPL-2.1"
+IUSE="+X afs avahi c++0x doc emacs examples fits fftw graphviz htmldoc
+	kerberos ldap +math +metric minimal mpi mysql odbc +opengl openmp oracle postgres
+	prefix pythia6 pythia8 python qt4 +reflex ruby sqlite ssl xinetd xml xrootd"
+
+REQUIRED_USE="
+	!X? ( !opengl !qt4 )
+	htmldoc? ( doc )
+	mpi? ( math !openmp )
+	openmp? ( math !mpi )
+	python? ( ${PYTHON_REQUIRED_USE} )"
+
+CDEPEND="
+	app-arch/xz-utils
+	>=dev-lang/cfortran-4.4-r2
+	dev-libs/libpcre
+	media-fonts/dejavu
+	media-libs/freetype
+	media-libs/giflib
+	media-libs/libpng:0
+	media-libs/tiff:0
+	sys-libs/zlib
+	virtual/jpeg
+	virtual/shadow
+	X? (
+		media-libs/ftgl
+		media-libs/glew
+		x11-libs/libX11
+		x11-libs/libXext
+		x11-libs/libXpm
+		!minimal? (
+			|| (
+				>=media-libs/libafterimage-1.20[gif,jpeg,png,tiff]
+				>=x11-wm/afterstep-2.2.11[gif,jpeg,png,tiff]
+			)
+			opengl? ( virtual/opengl virtual/glu x11-libs/gl2ps )
+			qt4? (
+				dev-qt/qtgui:4
+				dev-qt/qtopengl:4
+				dev-qt/qt3support:4
+				dev-qt/qtsvg:4
+				dev-qt/qtwebkit:4
+				dev-qt/qtxmlpatterns:4
+			)
+			x11-libs/libXft
+		)
+	)
+	!minimal? (
+		afs? ( net-fs/openafs )
+		avahi? ( net-dns/avahi )
+		emacs? ( virtual/emacs )
+		fits? ( sci-libs/cfitsio )
+		fftw? ( sci-libs/fftw:3.0 )
+		graphviz? ( media-gfx/graphviz )
+		kerberos? ( virtual/krb5 )
+		ldap? ( net-nds/openldap )
+		math? ( sci-libs/gsl sci-mathematics/unuran mpi? ( virtual/mpi ) )
+		mysql? ( virtual/mysql )
+		odbc? ( || ( dev-db/libiodbc dev-db/unixODBC ) )
+		oracle? ( dev-db/oracle-instantclient-basic )
+		postgres? ( dev-db/postgresql-base )
+		pythia6? ( sci-physics/pythia:6 )
+		pythia8? ( >=sci-physics/pythia-8.1.80:8 )
+		python? ( ${PYTHON_DEPS} )
+		ruby? (
+				dev-lang/ruby
+				dev-ruby/rubygems )
+		sqlite? ( dev-db/sqlite:3 )
+		ssl? ( dev-libs/openssl )
+		xml? ( dev-libs/libxml2 )
+		xrootd? ( >=net-libs/xrootd-3.2.0 )
+	)"
+
+DEPEND="${CDEPEND}
+	virtual/pkgconfig"
+
+RDEPEND="${CDEPEND}
+	reflex? ( dev-cpp/gccxml )
+	xinetd? ( sys-apps/xinetd )"
+
+PDEPEND="htmldoc? ( ~app-doc/root-docs-${PV} )"
+
+S="${WORKDIR}/${PN}"
+
+pkg_setup() {
+	fortran-2_pkg_setup
+	use python && python-single-r1_pkg_setup
+	echo
+	elog "There are extra options on packages not yet in Gentoo:"
+	elog "Afdsmgrd, AliEn, castor, Chirp, dCache, gfal, Globus, gLite,"
+	elog "HDFS, Monalisa, MaxDB/SapDB, SRP."
+	elog "You can use the env variable EXTRA_ECONF variable for this."
+	elog "For example, for SRP, you would set: "
+	elog "EXTRA_ECONF=\"--enable-srp --with-srp-libdir=${EROOT%/}/usr/$(get_libdir)\""
+	echo
+	enewgroup rootd
+	enewuser rootd -1 -1 /var/spool/rootd rootd
+	use minimal && return
+
+	if use math; then
+		if use openmp; then
+			if [[ $(tc-getCXX)$ == *g++* ]] && ! tc-has-openmp; then
+				ewarn "You are using a g++ without OpenMP capabilities"
+				die "Need an OpenMP capable compiler"
+			else
+				export USE_OPENMP=1 USE_PARALLEL_MINUIT2=1
+			fi
+		elif use mpi; then
+			export USE_MPI=1 USE_PARALLEL_MINUIT2=1
+		fi
+	fi
+	if use c++0x && [[ $(tc-getCXX) == *g++* ]] && \
+		! version_is_at_least "4.7" "$(gcc-version)"; then
+		eerror "You are using a g++ without C++0x capabilities"
+		die "Need an C++0x capable compiler"
+	fi
+}
+
+src_prepare() {
+	epatch \
+		"${FILESDIR}"/${PN}-${PATCH_PV2}-prop-flags.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV3}-nobyte-compile.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV}-glibc212.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV4}-unuran.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV2}-afs.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV2}-cfitsio.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV2}-chklib64.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV2}-dotfont.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV4}-pythia8.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV4}-desktop.patch
+
+	# make sure we use system libs and headers
+	rm montecarlo/eg/inc/cfortran.h README/cfortran.doc || die
+	rm -r graf2d/asimage/src/libAfterImage || die
+	rm -r graf3d/ftgl/{inc,src} || die
+	rm -r graf2d/freetype/src || die
+	rm -r graf3d/glew/{inc,src} || die
+	rm -r core/pcre/src || die
+	rm -r math/unuran/src/unuran-*.tar.gz || die
+	LANG=C LC_ALL=C find core/zip -type f -name "[a-z]*" -print0 | xargs -0 rm -f || die
+	rm -r core/lzma/src/*.tar.gz || die
+	rm graf3d/gl/{inc,src}/gl2ps.* || die
+	sed -i -e 's/^GLLIBS *:= .* $(OPENGLLIB)/& -lgl2ps/' graf3d/gl/Module.mk || die
+
+	# In Gentoo, libPythia6 is called libpythia6
+	# libungif is called libgif,
+	# iodbc is in /usr/include/iodbc
+	# pg_config.h is checked instead of libpq-fe.h
+	sed -i \
+		-e 's:libPythia6:libpythia6:g' \
+		-e 's:ungif:gif:g' \
+		-e 's:$ODBCINCDIR:$ODBCINCDIR /usr/include/iodbc:' \
+		-e 's:libpq-fe.h:pg_config.h:' \
+		configure || die "adjusting configure for Gentoo failed"
+
+	# prefixify the configure script
+	sed -i \
+		-e 's:/usr:${EPREFIX}/usr:g' \
+		configure || die "prefixify configure failed"
+
+	# QTDIR only used for qt3 in gentoo, and configure looks for it.
+	unset QTDIR
+
+	# Make html docs self-consistent for offline work (based on Fedora spec)
+	if use htmldoc && ! use minimal; then
+		epatch "${FILESDIR}"/${PN}-${PATCH_PV2}-htmldoc.patch
+		# make images local
+		sed 's!http://root.cern.ch/drupal/sites/all/themes/newsflash/images/blue/!!' \
+			-i etc/html/ROOT.css || die "htmldoc sed failed"
+		sed 's!http://root.cern.ch/drupal/sites/all/themes/newsflash/images/!!' \
+			-i etc/html/ROOT.css || die "htmldoc sed failed"
+		sed 's!http://root.cern.ch/drupal/sites/default/files/!!' \
+			-i etc/html/header.html || die "htmldoc sed failed"
+
+		cp "${DISTDIR}"/{rootdrawing-logo.png,root-banner.png,info.png} etc/html ||
+			die "htmldoc preparation failed"
+	fi
+}
+
+src_configure() {
+	# the configure script is not the standard autotools
+	local mycommonconf="
+		--prefix="${EPREFIX}"/usr \
+		--etcdir="${EPREFIX}"/etc/root \
+		--libdir="${EPREFIX}"/usr/$(get_libdir)/${PN} \
+		--docdir="${EPREFIX}"/usr/share/doc/${PF} \
+		--tutdir="${EPREFIX}"/usr/share/doc/${PF}/examples/tutorials \
+		--testdir="${EPREFIX}"/usr/share/doc/${PF}/examples/tests \
+		--with-cc=$(tc-getCC) \
+		--with-cxx=$(tc-getCXX) \
+		--with-f77=$(tc-getFC) \
+		--with-ld=$(tc-getCXX) \
+		--nohowto
+	"
+	if use minimal; then
+		./configure \
+			${mycommonconf} \
+			$(usex X --gminimal --minimal) \
+			|| die "configure failed"
+		return
+	fi
+	# cling is disabled because in requires live llvm and clang
+	./configure \
+		${mycommonconf} \
+		--with-afs-shared=yes \
+		--with-sys-iconpath="${EPREFIX}"/usr/share/pixmaps \
+		--disable-builtin-afterimage \
+		--disable-builtin-ftgl \
+		--disable-builtin-freetype \
+		--disable-builtin-glew \
+		--disable-builtin-pcre \
+		--disable-builtin-zlib \
+		--disable-builtin-lzma \
+		--disable-cling \
+		--enable-astiff \
+		--enable-explicitlink \
+		--enable-gdml \
+		--enable-memstat \
+		--enable-shadowpw \
+		--enable-shared	\
+		--enable-soversion \
+		--enable-table \
+		--fail-on-missing \
+		$(use_enable X x11) \
+		$(use_enable X asimage) \
+		$(use_enable X xft) \
+		$(use_enable afs) \
+		$(use_enable avahi bonjour) \
+		$(use_enable c++0x cxx11) \
+		$(use_enable fits fitsio) \
+		$(use_enable fftw fftw3) \
+		$(use_enable graphviz gviz) \
+		$(use_enable kerberos krb5) \
+		$(use_enable ldap) \
+		$(use_enable math gsl-shared) \
+		$(use_enable math genvector) \
+		$(use_enable math mathmore) \
+		$(use_enable math minuit2) \
+		$(use_enable math roofit) \
+		$(use_enable math tmva) \
+		$(use_enable math unuran) \
+		$(use_enable mysql) \
+		$(use_enable odbc) \
+		$(use_enable opengl) \
+		$(use_enable oracle) \
+		$(use_enable postgres pgsql) \
+		$(usex postgres "--with-pgsql-incdir=$(pg_config --includedir)" "") \
+		$(use_enable prefix rpath) \
+		$(use_enable pythia6) \
+		$(use_enable pythia8) \
+		$(use_enable python) \
+		$(use_enable qt4 qt) \
+		$(use_enable qt4 qtgsi) \
+		$(use_enable reflex cintex) \
+		$(use_enable reflex) \
+		$(use_enable ruby) \
+		$(use_enable sqlite) \
+		$(use_enable ssl) \
+		$(use_enable xml) \
+		$(use_enable xrootd) \
+		${EXTRA_ECONF} \
+		|| die "configure failed"
+}
+
+src_compile() {
+	emake OPT="${CXXFLAGS}" F77OPT="${FFLAGS}" ROOTSYS="${S}" LD_LIBRARY_PATH="${S}/lib"
+	if use emacs && ! use minimal; then
+		elisp-compile build/misc/*.el || die "elisp-compile failed"
+	fi
+}
+
+doc_install() {
+	cd "${S}"
+	if use doc && ! use minimal; then
+		einfo "Installing user's guides"
+		if use metric; then
+			dodoc "${DISTDIR}"/ROOTUsersGuideA4-${PV}.pdf
+			dodoc "${DISTDIR}"/ROOTPrimer-${PV}.pdf
+			use math && dodoc "${DISTDIR}"/Spectrum-${PV}.pdf
+		else
+			dodoc "${DISTDIR}"/ROOTUsersGuideLetter-${PV}.pdf
+			dodoc "${DISTDIR}"/ROOTPrimerLetter-${PV}.pdf
+			use math && dodoc "${DISTDIR}"/SpectrumLetter-${PV}.pdf
+		fi
+		use math && dodoc \
+			"${DISTDIR}"/RooFit_Users_Manual_${ROOFIT_DOC_PV}.pdf \
+			"${DISTDIR}"/TMVAUsersGuide-v${TMVA_DOC_PV}.pdf
+	fi
+
+	if use examples && ! use minimal; then
+		# these should really be taken care of by the root make install
+		insinto /usr/share/doc/${PF}/examples/tutorials/tmva
+		doins -r tmva/test
+	else
+		rm -r "${ED}"/usr/share/doc/${PF}/examples || die
+	fi
+}
+
+daemon_install() {
+	cd "${S}"
+	local daemons="rootd proofd"
+	dodir /var/spool/rootd
+	fowners rootd:rootd /var/spool/rootd
+	dodir /var/spool/rootd/{pub,tmp}
+	fperms 1777 /var/spool/rootd/{pub,tmp}
+
+	for i in ${daemons}; do
+		newinitd "${FILESDIR}"/${i}.initd ${i}
+		newconfd "${FILESDIR}"/${i}.confd ${i}
+	done
+	if use xinetd; then
+		insinto /etc/xinetd
+		doins etc/daemons/{rootd,proofd}.xinetd
+	fi
+}
+
+desktop_install() {
+	cd "${S}"
+	echo "Icon=root-system-bin" >> etc/root.desktop
+	domenu etc/root.desktop
+	doicon build/package/debian/root-system-bin.png
+
+	insinto /usr/share/icons/hicolor/48x48/mimetypes
+	doins build/package/debian/application-x-root.png
+
+	insinto /usr/share/icons/hicolor/48x48/apps
+	doicon build/package/debian/root-system-bin.xpm
+}
+
+src_install() {
+	emake DESTDIR="${D}" install
+
+	echo "LDPATH=${EPREFIX}/usr/$(get_libdir)/root" > 99root
+	if ! use minimal; then
+		use pythia8 && echo "PYTHIA8=${EPREFIX}/usr" >> 99root
+		if use python; then
+			echo "PYTHONPATH=${EPREFIX}/usr/$(get_libdir)/root" >> 99root
+			python_optimize "${D}/usr/$(get_libdir)/root"
+		fi
+		use ruby && echo "RUBYLIB=${EPREFIX}/usr/$(get_libdir)/root" >> 99root
+	fi
+	doenvd 99root
+
+	# The build system installs Emacs support unconditionally and in the wrong
+	# directory. Remove it and call elisp-install in case of USE=emacs.
+	rm -r "${ED}"/usr/share/emacs
+	if use emacs && ! use minimal; then
+		elisp-install ${PN} build/misc/*.{el,elc} || die "elisp-install failed"
+	fi
+
+	doc_install
+	daemon_install
+	desktop_install
+
+	# Cleanup of files either already distributed or unused on Gentoo
+	rm "${ED}"usr/share/doc/${PF}/{INSTALL,LICENSE,COPYING.CINT} || die
+	rm "${ED}"usr/share/root/fonts/LICENSE || die
+	pushd "${ED}"usr/$(get_libdir)/root/cint/cint/lib > /dev/null
+	rm posix/mktypes dll_stl/setup \
+		G__* dll_stl/G__* dll_stl/rootcint_* posix/exten.o || die
+	rm "${ED}"usr/$(get_libdir)/root/cint/cint/include/makehpib || die
+	rm "${ED}"/etc/root/proof/*.sample || die
+	rm -r "${ED}"/etc/root/daemons || die
+	popd > /dev/null
+	# these should be in PATH
+	mv "${ED}"etc/root/proof/utils/pq2/pq2* \
+		"${ED}"usr/bin/ || die
+}
+
+pkg_postinst() {
+	fdo-mime_desktop_database_update
+}
+
+pkg_postrm() {
+	fdo-mime_desktop_database_update
+}