updated to latest upstream release with pvfs2 support and shared lib fixes

Package-Manager: portage-2.1.4_rc1

9 files changed, 630 insertions, 11 deletions

diff --git a/sys-cluster/mpich2/ChangeLog b/sys-cluster/mpich2/ChangeLog
index 2b76374b9720..40abf0365d5d 100644
--- a/sys-cluster/mpich2/ChangeLog
+++ b/sys-cluster/mpich2/ChangeLog
@@ -1,6 +1,17 @@
 # ChangeLog for sys-cluster/mpich2
 # Copyright 1999-2007 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sys-cluster/mpich2/ChangeLog,v 1.21 2007/07/10 04:57:34 nerdboy Exp $
+# $Header: /var/cvsroot/gentoo-x86/sys-cluster/mpich2/ChangeLog,v 1.22 2007/12/03 06:03:02 nerdboy Exp $
+
+*mpich2-1.0.6 (03 Dec 2007)
+
+  03 Dec 2007; Steve Arnold <nerdboy@gentoo.org>
+  +files/mpich2-1.0.6-cxx.patch, +files/mpich2-1.0.6-fPIC.patch,
+  +files/mpich2-1.0.6-makefile.patch, +files/mpich2-1.0.6-shlib.patch,
+  mpich2-1.0.5_p4.ebuild, +mpich2-1.0.6.ebuild:
+  Updated to latest upstream release with pvfs2 support and shared lib fixes;
+  this version actually has proper shared libraries and support for pvfs2, so
+  feel free to test and report any problems.  Tested successfully with hdf5-
+  parallel (but needs real cluster testing).
 
   10 Jul 2007; Steve Arnold <nerdboy@gentoo.org> mpich2-1.0.5_p4.ebuild:
   fixed a leftover development hack alertly noticed by Mr_Bones
diff --git a/sys-cluster/mpich2/Manifest b/sys-cluster/mpich2/Manifest
index 9df17ece1332..626df8945ca2 100644
--- a/sys-cluster/mpich2/Manifest
+++ b/sys-cluster/mpich2/Manifest
@@ -26,8 +26,25 @@ AUX mpich2-1.0.5_p4-soname.patch 1201 RMD160 9ff5a58e828f1c51d963002ac14de21e8cf
 MD5 452ee396ae89c5605161ef0cb6ae323c files/mpich2-1.0.5_p4-soname.patch 1201
 RMD160 9ff5a58e828f1c51d963002ac14de21e8cff2995 files/mpich2-1.0.5_p4-soname.patch 1201
 SHA256 5625f28ac75530099a8230b9b1679f11977079f92e6ddfa75d371e02e3f4b7e3 files/mpich2-1.0.5_p4-soname.patch 1201
+AUX mpich2-1.0.6-cxx.patch 800 RMD160 520fb52b2673f2621a608e04cfdba8bde07de9e8 SHA1 c173951896f8f8f9715dea1054a1b1f9d0460a41 SHA256 e1fce30688a0d53ebe2f92f059a9f86af8a713e6492be5f0323b68669da8c7c7
+MD5 ae8821a50d97cb1c173b076e0748a4ef files/mpich2-1.0.6-cxx.patch 800
+RMD160 520fb52b2673f2621a608e04cfdba8bde07de9e8 files/mpich2-1.0.6-cxx.patch 800
+SHA256 e1fce30688a0d53ebe2f92f059a9f86af8a713e6492be5f0323b68669da8c7c7 files/mpich2-1.0.6-cxx.patch 800
+AUX mpich2-1.0.6-fPIC.patch 4071 RMD160 17f5fefa2f6b32f3ccdd53c82305701b26756f31 SHA1 40d151f8e0a3a713f025c820ec5f0bd689430f2e SHA256 133a7629fd81ba112677ff71a9b8021ed51f4b1c03c567ad03d0ddfc2b7889da
+MD5 672fc31c3d7f2cff5bb0a8f16327e928 files/mpich2-1.0.6-fPIC.patch 4071
+RMD160 17f5fefa2f6b32f3ccdd53c82305701b26756f31 files/mpich2-1.0.6-fPIC.patch 4071
+SHA256 133a7629fd81ba112677ff71a9b8021ed51f4b1c03c567ad03d0ddfc2b7889da files/mpich2-1.0.6-fPIC.patch 4071
+AUX mpich2-1.0.6-makefile.patch 1758 RMD160 af1eafc2e65d7ef33206c945c947418920704268 SHA1 c81be875e94a8b298fc10b7b7370393003151fd4 SHA256 4ab34c5dc07322dc71df29d27ae96c9e88f1af444f980547dc5d3a055fdd2577
+MD5 0417ac525772398c94d665b959ec068e files/mpich2-1.0.6-makefile.patch 1758
+RMD160 af1eafc2e65d7ef33206c945c947418920704268 files/mpich2-1.0.6-makefile.patch 1758
+SHA256 4ab34c5dc07322dc71df29d27ae96c9e88f1af444f980547dc5d3a055fdd2577 files/mpich2-1.0.6-makefile.patch 1758
+AUX mpich2-1.0.6-shlib.patch 1576 RMD160 b68da396b97cfce783e5439eb53388c96ee74bef SHA1 0f6f7f929d69ec70c5ec14a785c4388a032166b7 SHA256 32ed3e4fa4048b3efcea3db55326c89ccb50bf86d0928e6fc8b0b3e715702089
+MD5 1f63798fa81f9401d9ec97044490b65a files/mpich2-1.0.6-shlib.patch 1576
+RMD160 b68da396b97cfce783e5439eb53388c96ee74bef files/mpich2-1.0.6-shlib.patch 1576
+SHA256 32ed3e4fa4048b3efcea3db55326c89ccb50bf86d0928e6fc8b0b3e715702089 files/mpich2-1.0.6-shlib.patch 1576
 DIST mpich2-1.0.3.tar.gz 12166368 RMD160 5e7cd42f8359d81e6578d1fffca4708471e03cec SHA1 0ca48abaa98e98f0136508463886aad39ecefccb SHA256 294717fc05e9d509ed0e45c99709ddba696ad6919c47fc0801a410fe129623df
 DIST mpich2-1.0.5p4.tar.gz 12849546 RMD160 1a2b56468f88c5b4704662ae0dc6d648a6ca8a65 SHA1 ba561841047e5ed2f6d508a3cb4cf9727feadcf8 SHA256 4b819d318ec514c350ce0fea730126faa2ef36b5f00bc72c4a097dcf9979918d
+DIST mpich2-1.0.6p1.tar.gz 15437620 RMD160 c3249bec1936bd9f3de9a8bb83f29bd32b06c191 SHA1 f8acd360df0380774d74804a706ffc1022acd62e SHA256 38808f96071965c79451a8d975fe4f28454f56f27a19ce13b2aec85012521fcc
 EBUILD mpich2-1.0.3-r1.ebuild 6126 RMD160 5997a07983cb830b61eb896a465b3b30f06fc230 SHA1 1bcd172f8a935d0001391bba75d108e4042729e5 SHA256 db8638f583ea3dbbb37b051243fa1a308892eff657bfb28401f4ea212e025661
 MD5 bcdf741ebc6cd0bfc8f0f8459e9ace5a mpich2-1.0.3-r1.ebuild 6126
 RMD160 5997a07983cb830b61eb896a465b3b30f06fc230 mpich2-1.0.3-r1.ebuild 6126
@@ -36,14 +53,18 @@ EBUILD mpich2-1.0.3.ebuild 2824 RMD160 f215c70b49f7958632b5dd279e48e1113aa44e89
 MD5 9983d71f808e47f177b973a2c830cdb1 mpich2-1.0.3.ebuild 2824
 RMD160 f215c70b49f7958632b5dd279e48e1113aa44e89 mpich2-1.0.3.ebuild 2824
 SHA256 b43eadd778c65a41c37dee52c8d48924907d9b26e1ebd5f22ed976b8857901a8 mpich2-1.0.3.ebuild 2824
-EBUILD mpich2-1.0.5_p4.ebuild 6128 RMD160 283a8c918e13a3cb6e0bfb52ce306cd0b920c82b SHA1 18ebfeaf12a1ffcddfa583a88b9bc419b41ad878 SHA256 ea296a0d3106325a49bde06079b7ff1c5c4ab2d24e2200f696796212511a4bf2
-MD5 4d0d44015a01f703b7e967f4a416e033 mpich2-1.0.5_p4.ebuild 6128
-RMD160 283a8c918e13a3cb6e0bfb52ce306cd0b920c82b mpich2-1.0.5_p4.ebuild 6128
-SHA256 ea296a0d3106325a49bde06079b7ff1c5c4ab2d24e2200f696796212511a4bf2 mpich2-1.0.5_p4.ebuild 6128
-MISC ChangeLog 4793 RMD160 d698bc273a0b99cd0c94d85a2aecb60350c65a83 SHA1 c772fa28fb57d1bc2bbae974ace6ec4aacc16901 SHA256 ffa23d4ae5443feeec9a435672dd669ee6f8105149c6d699fd6cca8f92810b98
-MD5 ef5c9e792cc6d7b7fa2a779f15112af3 ChangeLog 4793
-RMD160 d698bc273a0b99cd0c94d85a2aecb60350c65a83 ChangeLog 4793
-SHA256 ffa23d4ae5443feeec9a435672dd669ee6f8105149c6d699fd6cca8f92810b98 ChangeLog 4793
+EBUILD mpich2-1.0.5_p4.ebuild 6140 RMD160 6201f8e82c836dae1625eabedb9dded7df225dbd SHA1 ff6ab8e33aaacb8762ca931263d69d694f1fbc34 SHA256 f8ad7e2459842c1784c74d593d2ba59e9843b710c80ba3ca71005be1130e0f30
+MD5 f5493661b52b16c7f5494db0d216253e mpich2-1.0.5_p4.ebuild 6140
+RMD160 6201f8e82c836dae1625eabedb9dded7df225dbd mpich2-1.0.5_p4.ebuild 6140
+SHA256 f8ad7e2459842c1784c74d593d2ba59e9843b710c80ba3ca71005be1130e0f30 mpich2-1.0.5_p4.ebuild 6140
+EBUILD mpich2-1.0.6.ebuild 10286 RMD160 be9d9116623302a8273c3efbae6b35fedcb6edeb SHA1 5d9d241b9b58538f5d0cd6ac8f2f7fad7c9a114a SHA256 6c11b62acff23a01eea3cd5b95c6689d6e47b609855d3d9ef4f8d37b81f2aaa9
+MD5 5f40d676756caea6f54074698b77929d mpich2-1.0.6.ebuild 10286
+RMD160 be9d9116623302a8273c3efbae6b35fedcb6edeb mpich2-1.0.6.ebuild 10286
+SHA256 6c11b62acff23a01eea3cd5b95c6689d6e47b609855d3d9ef4f8d37b81f2aaa9 mpich2-1.0.6.ebuild 10286
+MISC ChangeLog 5334 RMD160 7a820b0836a5de58e76b4caee1045d249def8b0f SHA1 a476b329f133249721f5ea0f57c632f4bbd3395d SHA256 ae8ebb43a3757dc34e2641992553a31dd2dcd081783bb034c5a7659398cdd470
+MD5 d61624b7ba1a7d73e7a0d9a151f35286 ChangeLog 5334
+RMD160 7a820b0836a5de58e76b4caee1045d249def8b0f ChangeLog 5334
+SHA256 ae8ebb43a3757dc34e2641992553a31dd2dcd081783bb034c5a7659398cdd470 ChangeLog 5334
 MISC metadata.xml 252 RMD160 10123b1072a83227cac20dfe2a5065a3a6851563 SHA1 571c3db0391f894cb0bcbda2e3c5bd561482aca6 SHA256 cbf48aa7f9f6669327e88c9825ece05758d93afffa5c30b9b28568131b008367
 MD5 f3a1d3eb35133f846cfa104bad3643ad metadata.xml 252
 RMD160 10123b1072a83227cac20dfe2a5065a3a6851563 metadata.xml 252
@@ -57,3 +78,6 @@ SHA256 0727f804a0eaf436ee9176bbd390adf2b28b409e61f20a30491ea3782dd72e0a files/di
 MD5 6fe1fdde60955546c4ca3b692e30ed3c files/digest-mpich2-1.0.5_p4 250
 RMD160 712c86361146fcb940ec5514e437261eca544d88 files/digest-mpich2-1.0.5_p4 250
 SHA256 7f4f29770d77a7fbc02574a499c5c265ed9cbf3c6ce2157a42d7307153591804 files/digest-mpich2-1.0.5_p4 250
+MD5 ad9632c8a44835a69d6e35071afab697 files/digest-mpich2-1.0.6 250
+RMD160 963e5f2ac3e9989057545d29553a255da9b6e94b files/digest-mpich2-1.0.6 250
+SHA256 06c63d1bb2a430fe0a5235cec0894c5bb5f3a76a97a97c17041235486eb118e5 files/digest-mpich2-1.0.6 250
diff --git a/sys-cluster/mpich2/files/digest-mpich2-1.0.6 b/sys-cluster/mpich2/files/digest-mpich2-1.0.6
new file mode 100644
index 000000000000..5e641d5f68ff
--- /dev/null
+++ b/sys-cluster/mpich2/files/digest-mpich2-1.0.6
@@ -0,0 +1,3 @@
+MD5 6373b7824a782e890ecf4bfb77cbc4cc mpich2-1.0.6p1.tar.gz 15437620
+RMD160 c3249bec1936bd9f3de9a8bb83f29bd32b06c191 mpich2-1.0.6p1.tar.gz 15437620
+SHA256 38808f96071965c79451a8d975fe4f28454f56f27a19ce13b2aec85012521fcc mpich2-1.0.6p1.tar.gz 15437620
diff --git a/sys-cluster/mpich2/files/mpich2-1.0.6-cxx.patch b/sys-cluster/mpich2/files/mpich2-1.0.6-cxx.patch
new file mode 100644
index 000000000000..4595d0623740
--- /dev/null
+++ b/sys-cluster/mpich2/files/mpich2-1.0.6-cxx.patch
@@ -0,0 +1,31 @@
+--- configure.orig	2007-10-14 13:47:58.000000000 -0700
++++ configure	2007-10-14 13:50:27.000000000 -0700
+@@ -655,6 +655,7 @@
+ NUMVERSION
+ VERSION
+ ABIVERSION
++CXXLIBPATH
+ CONFIGURE_ARGUMENTS
+ MPIFLIBNAME
+ PMPIFLIBNAME
+@@ -2199,6 +2200,10 @@
+ # libtool manual)
+ ABIVERSION="1:1"
+ 
++# This is needed for the C++ wrapper lib build (so we don't have unresolved
++# symbols).  The value is replaced via sed in the ebuild.
++export CXXLIBPATH="nerdboy"
++
+ CONFIGURE_ARGUMENTS="$ac_configure_args"
+ 
+ if test -n "$ac_configure_args" ; then
+--- Makefile.in.orig	2007-10-14 14:51:03.000000000 -0700
++++ Makefile.in	2007-10-14 15:27:04.000000000 -0700
+@@ -27,6 +27,7 @@
+ MAKE            = @MAKE@
+ MPILIBNAME      = @MPILIBNAME@
+ PMPILIBNAME     = @PMPILIBNAME@
++CXXLIBPATH	= @CXXLIBPATH@
+ 
+ 
+ VPATH = .:@srcdir@
diff --git a/sys-cluster/mpich2/files/mpich2-1.0.6-fPIC.patch b/sys-cluster/mpich2/files/mpich2-1.0.6-fPIC.patch
new file mode 100644
index 000000000000..33fee9aa49c5
--- /dev/null
+++ b/sys-cluster/mpich2/files/mpich2-1.0.6-fPIC.patch
@@ -0,0 +1,107 @@
+--- configure.orig	2007-10-10 20:59:53.000000000 -0700
++++ configure	2007-10-10 21:04:17.000000000 -0700
+@@ -8783,24 +8783,24 @@
+ 	 # if the compiler allows it (e.g., building with gcc but
+ 	 # a different Fortran compiler. Another option is to
+ 	 # *require* g77.
+-	 { echo "$as_me:$LINENO: checking whether $F77 allows -shared -fpic" >&5
+-echo $ECHO_N "checking whether $F77 allows -shared -fpic... $ECHO_C" >&6; }
++	 { echo "$as_me:$LINENO: checking whether $F77 allows -shared -fPIC" >&5
++echo $ECHO_N "checking whether $F77 allows -shared -fPIC... $ECHO_C" >&6; }
+ 	 rm -f conftest.f
+ 	 cat > conftest.f <<EOF
+        program main
+        end
+ EOF
+-         if $F77 -shared -fpic -o conftest conftest.f >/dev/null 2>&1 ; then
+-	     FC_SHL="$F77 -shared -fpic"
++         if $F77 -shared -fPIC -o conftest conftest.f >/dev/null 2>&1 ; then
++	     FC_SHL="$F77 -shared -fPIC"
+              { echo "$as_me:$LINENO: result: yes" >&5
+ echo "${ECHO_T}yes" >&6; }
+          else
+              { echo "$as_me:$LINENO: result: no" >&5
+ echo "${ECHO_T}no" >&6; }
+-             { echo "$as_me:$LINENO: checking whether $F77 allows -fpic" >&5
+-echo $ECHO_N "checking whether $F77 allows -fpic... $ECHO_C" >&6; }
+-             if $F77 -fpic -o conftest conftest.f >/dev/null 2>&1 ; then
+-	         FC_SHL="$F77 -fpic"
++             { echo "$as_me:$LINENO: checking whether $F77 allows -fPIC" >&5
++echo $ECHO_N "checking whether $F77 allows -fPIC... $ECHO_C" >&6; }
++             if $F77 -fPIC -o conftest conftest.f >/dev/null 2>&1 ; then
++	         FC_SHL="$F77 -fPIC"
+                  { echo "$as_me:$LINENO: result: yes" >&5
+ echo "${ECHO_T}yes" >&6; }
+              else
+@@ -9837,7 +9837,7 @@
+     gcc)
+     if test "$pac_cv_f90_vendor" = gnu -o "$F90" = "g95" ; then
+         # If we have the GNU Fortran 95 compiler (untested)
+-        F90_SHL="$F90 -shared -fpic"
++        F90_SHL="$F90 -shared -fPIC"
+         F90_LINKPATH_SHL="-Wl,-rpath -Wl,"
+     else
+         case "$pac_cv_f90_vendor" in
+@@ -9848,13 +9848,13 @@
+ 
+ 	    intel)
+ 	    # Intel implements the GNU options
+-	    F90_SHL="$F90 -shared -fpic"
++	    F90_SHL="$F90 -shared -fPIC"
+             F90_LINKPATH_SHL="-Wl,-rpath -Wl,"
+ 	    ;;
+ 
+ 	    pgi)
+ 	    # Portland Group implements the GNU options
+-	    F90_SHL="$F90 -shared -fpic"
++	    F90_SHL="$F90 -shared -fPIC"
+             F90_LINKPATH_SHL="-Wl,-rpath -Wl,"
+ 	    ;;
+ 
+@@ -10852,7 +10852,7 @@
+ 	;;
+ 	gcc)
+         # Assume that the compiler is g++ if gcc style shared libraries chosen
+-        CXX_SHL="$CXX -shared -fpic"
++        CXX_SHL="$CXX -shared -fPIC"
+         CXX_LINKPATH_SHL="-Wl,-rpath -Wl,"
+ 	;;
+ 	cygwin|cygwin-gcc)
+@@ -12571,7 +12571,7 @@
+     # For example, include the libname as ${LIBNAME_SHL}
+     #C_LINK_SHL='${CC} -shared -Wl,-h,<finallibname>'
+     # May need -fPIC
+-    CC_SHL='${CC} -fpic'
++    CC_SHL='${CC} -fPIC'
+     #C_LINKPATH_SHL="-Wl,-rpath -Wl,"
+     # More recent versions allow multiple args, separated by commas
+     C_LINKPATH_SHL="-Wl,-rpath,"
+@@ -12839,7 +12839,7 @@
+     gcc)
+     # For example, include the libname as ${LIBNAME_SHL}
+     #C_LINK_SHL='${CC} -shared -Wl,-h,<finallibname>'
+-    pac_cc_sharedlibs='gcc -shared -fpic'
++    pac_cc_sharedlibs='gcc -shared -fPIC'
+     pac_clink_sharedlibs='gcc -shared'
+     ;;
+     libtool)
+--- confdb/aclocal_shl.m4.orig	2007-05-16 06:39:01.000000000 -0700
++++ confdb/aclocal_shl.m4	2007-10-10 21:05:15.000000000 -0700
+@@ -89,7 +89,7 @@
+     # For example, include the libname as ${LIBNAME_SHL}
+     #C_LINK_SHL='${CC} -shared -Wl,-h,<finallibname>'
+     # May need -fPIC 
+-    CC_SHL='${CC} -fpic'
++    CC_SHL='${CC} -fPIC'
+     #C_LINKPATH_SHL="-Wl,-rpath -Wl,"
+     # More recent versions allow multiple args, separated by commas
+     C_LINKPATH_SHL="-Wl,-rpath,"
+@@ -233,7 +233,7 @@
+     gcc)
+     # For example, include the libname as ${LIBNAME_SHL}
+     #C_LINK_SHL='${CC} -shared -Wl,-h,<finallibname>'
+-    pac_cc_sharedlibs='gcc -shared -fpic'
++    pac_cc_sharedlibs='gcc -shared -fPIC'
+     pac_clink_sharedlibs='gcc -shared'
+     ;;
+     libtool)
diff --git a/sys-cluster/mpich2/files/mpich2-1.0.6-makefile.patch b/sys-cluster/mpich2/files/mpich2-1.0.6-makefile.patch
new file mode 100644
index 000000000000..167ab5053b62
--- /dev/null
+++ b/sys-cluster/mpich2/files/mpich2-1.0.6-makefile.patch
@@ -0,0 +1,24 @@
+--- Makefile.in.orig	2007-10-11 22:06:10.000000000 -0700
++++ Makefile.in	2007-10-11 22:18:48.000000000 -0700
+@@ -125,17 +125,17 @@
+ C_COMPILE       = $(CC) $(DEFS) $(INCLUDES) $(CFLAGS) $(CPPFLAGS)
+ # Build the shared library from the shared object files
+ lib/lib${MPILIBNAME}.@SHLIB_EXT@: lib/lib${MPILIBNAME}.la
+-	(cd lib && $(CREATESHLIB) --mode=link -version-info "@ABIVERSION@" -o lib${MPILIBNAME}.la  -rpath $(libdir) )
++	(cd lib && $(CREATESHLIB) --mode=link -version-info "@ABIVERSION@" -o lib${MPILIBNAME}.la  -rpath $(libdir) -L${libdir} -laio )
+ 	if [ -n "@NO_WEAK_SYM@" -a \
+ 		"${MPILIBNAME}" != "${PMPILIBNAME}" ] ; then \
+-	(cd lib && $(CREATESHLIB) --mode=link -version-info "@ABIVERSION@" -o lib${PMPILIBNAME}.la  -rpath $(libdir) );\
++	(cd lib && $(CREATESHLIB) --mode=link -version-info "@ABIVERSION@" -o lib${PMPILIBNAME}.la  -rpath $(libdir) -L${libdir} -laio );\
+ 	fi
+ # Build the shared library from the shared object files
+ lib/libf${MPILIBNAME}.@SHLIB_EXT@: lib/libf${MPILIBNAME}.la
+-	(cd lib && $(CREATESHLIB) --mode=link -version-info "@ABIVERSION@" -o libf${MPILIBNAME}.la  -rpath $(libdir) -L. -l$(MPILIBNAME))
++	(cd lib && $(CREATESHLIB) --mode=link -version-info "@ABIVERSION@" -o libf${MPILIBNAME}.la  -rpath $(libdir) -L. -l${MPILIBNAME} )
+ # Build the shared library from the shared object files
+ lib/lib${MPICXXLIBNAME}.@SHLIB_EXT@: lib/lib${MPICXXLIBNAME}.la
+-	(cd lib && $(CREATESHLIB) --mode=link -version-info "@ABIVERSION@" -o lib${MPICXXLIBNAME}.la  -rpath $(libdir) )
++	(cd lib && $(CREATESHLIB) --mode=link -version-info "@ABIVERSION@" -o lib${MPICXXLIBNAME}.la  -rpath $(libdir) -L. -l${MPILIBNAME} -Lnerdboy -lstdc++ )
+ 
+ # --------------------------------------------------------------------------
+ .libstamp0: 
diff --git a/sys-cluster/mpich2/files/mpich2-1.0.6-shlib.patch b/sys-cluster/mpich2/files/mpich2-1.0.6-shlib.patch
new file mode 100644
index 000000000000..42ca8f6569af
--- /dev/null
+++ b/sys-cluster/mpich2/files/mpich2-1.0.6-shlib.patch
@@ -0,0 +1,48 @@
+--- src/util/createshlib.in.orig	2007-09-12 07:39:20.000000000 -0700
++++ src/util/createshlib.in	2007-10-13 10:06:51.000000000 -0700
+@@ -207,12 +207,12 @@
+ 
+     *)
+     # Typical Unix default
+-    soName=$srclibbase.$SHLIB_EXT.$dottedVersion
++    soName=$srclibbase.$SHLIB_EXT.$majorVersion
+     realName=$srclibbase.$SHLIB_EXT.$dottedVersion
+     altNames="$srclibbase.$SHLIB_EXT"
+-    if [ -n "$majorVersion" ] ; then
+-	altNames="$altNames $srclibbase.$SHLIB_EXT.$majorVersion"
+-    fi
++#    if [ -n "$majorVersion" ] ; then
++#	altNames="$altNames $srclibbase.$SHLIB_EXT.$majorVersion"
++#    fi
+     ;;
+ esac
+ 
+@@ -293,15 +293,16 @@
+         # Typically -Wl,-h,$soName
+ 	# FIXME: C_LINK_SHL knows the options for shared libraries,
+ 	# but not the args for setting the soname.
+-	$Show ${C_LINK_SHL} -o $realName -Wl,-h,$soName .tmp/*.o 
+-	# Do we need to add $dependentLibs ?
++	$Show ${C_LINK_SHL} -Wl,-soname,$soName -o $realName .tmp/*.o $dependentLibs
++	# Do we need to add $dependentLibs ? Yes!
+ 	;;
+     esac
+     if [ -n "$altNames" ] ; then
+         for alt in $altNames ; do
+ 	    # Remove any alternate names before executing the ln step
+ 	    rm -f $alt
+-            $Show ln -s $realName $alt
++	    $Show ln -s $realName $soName
++	    $Show ln -s $soName $alt
+         done
+     fi
+ 
+@@ -345,7 +346,7 @@
+     fi
+     if [ -n "$altNames" ] ; then
+         for alt in $altNames ; do
+-            ( cd $destdir && $Show rm -f $alt && $Show ln -s $realName $alt )
++            ( cd $destdir && $Show rm -f $alt && $Show ln -s $soName $alt )
+         done
+     fi
+ fi
diff --git a/sys-cluster/mpich2/mpich2-1.0.5_p4.ebuild b/sys-cluster/mpich2/mpich2-1.0.5_p4.ebuild
index 142d4836b099..a84df3190ca1 100644
--- a/sys-cluster/mpich2/mpich2-1.0.5_p4.ebuild
+++ b/sys-cluster/mpich2/mpich2-1.0.5_p4.ebuild
@@ -1,6 +1,6 @@
 # Copyright 1999-2007 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sys-cluster/mpich2/mpich2-1.0.5_p4.ebuild,v 1.2 2007/07/10 04:57:34 nerdboy Exp $
+# $Header: /var/cvsroot/gentoo-x86/sys-cluster/mpich2/mpich2-1.0.5_p4.ebuild,v 1.3 2007/12/03 06:03:02 nerdboy Exp $
 
 inherit eutils fortran distutils autotools kde-functions toolchain-funcs java-pkg
 
@@ -11,7 +11,7 @@ SRC_URI="ftp://ftp.mcs.anl.gov/pub/mpi/${MY_P}.tar.gz"
 
 LICENSE="as-is"
 SLOT="0"
-KEYWORDS="~amd64 ~x86"
+KEYWORDS="~amd64 ~ppc ~ppc64 ~x86"
 IUSE="crypt cxx debug doc fast fortran mpe mpe-sdk romio threads"
 
 DEPEND="virtual/libc
diff --git a/sys-cluster/mpich2/mpich2-1.0.6.ebuild b/sys-cluster/mpich2/mpich2-1.0.6.ebuild
new file mode 100644
index 000000000000..44248caf1832
--- /dev/null
+++ b/sys-cluster/mpich2/mpich2-1.0.6.ebuild
@@ -0,0 +1,371 @@
+# Copyright 1999-2007 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sys-cluster/mpich2/mpich2-1.0.6.ebuild,v 1.1 2007/12/03 06:03:02 nerdboy Exp $
+
+inherit autotools distutils eutils flag-o-matic fortran java-pkg-2
+
+#MY_P=${P/_/}
+MY_P=${P}p1
+S="${WORKDIR}/${MY_P}"
+
+DESCRIPTION="MPICH2 - A portable MPI implementation"
+HOMEPAGE="http://www-unix.mcs.anl.gov/mpi/mpich2"
+SRC_URI="http://www.mcs.anl.gov/research/projects/mpich2/downloads/${MY_P}.tar.gz"
+#SRC_URI="ftp://ftp.mcs.anl.gov/pub/mpi/${MY_P}.tar.gz"
+
+LICENSE="as-is"
+SLOT="0"
+KEYWORDS="~amd64 ~ppc ~ppc64 ~x86"
+IUSE="crypt cxx debug doc fast fortran mpe mpe-sdk pvfs2 romio threads"
+
+DEPEND="virtual/libc
+	sys-devel/libtool
+	dev-lang/perl
+	>=dev-lang/python-2.3
+	mpe-sdk? ( >=virtual/jdk-1.5
+		x11-proto/xproto )
+	romio? ( >=dev-libs/libaio-0.3.106
+		net-fs/nfs-utils )
+	pvfs2? ( >=sys-cluster/pvfs2-2.7.0 )
+	doc? ( virtual/tetex )"
+
+RDEPEND="${DEPEND}
+	mpe-sdk? ( x11-libs/libX11 )
+	crypt? ( net-misc/openssh )
+	!crypt? ( net-misc/netkit-rsh )
+	!sys-cluster/mpich
+	!sys-cluster/lam-mpi
+	!sys-cluster/openmpi
+	!media-sound/mpd
+	!media-sound/mpd-svn"
+
+WANT_AUTOCONF="2.5"
+AT_M4DIR="${S}/confdb"
+
+RESTRICT="test"
+# To-do: work on tests and add SCTP support for kernel and user tools
+# Initial test implementation doesn't work yet - feel free to fix it...
+
+pkg_setup() {
+	if [ -n "${MPICH_CONFIGURE_OPTS}" ]; then
+	    elog "User-specified configure options are ${MPICH_CONFIGURE_OPTS}."
+	else
+	    elog "User-specified configure options are not set."
+	    elog "If needed, see the docs and set MPICH_CONFIGURE_OPTS."
+	fi
+
+	if use fortran ; then
+	    if [ $(gcc-major-version) -ge 4 ] \
+		&& built_with_use sys-devel/gcc fortran ; then
+		    FORTRAN="gfortran"
+		    MPI_FFLAGS="-ff2c"
+		    fortran_pkg_setup
+	    else
+		ewarn "You need gcc-4 built with fortran support in order to"
+		ewarn "build the f90 mpi interface, which is required for f90"
+		ewarn "and mpi support in hdf5 (for example)."
+		FORTRAN="g77 f2c"
+		fortran_pkg_setup
+	    fi
+	else
+	    ewarn "Unless you have another f90 compiler installed, we can only"
+	    ewarn "build the C and C++ interfaces with gcc-3.x"
+	fi
+
+	if use mpe-sdk; then
+	    java-pkg-2_pkg_setup
+	    if use x86; then
+		jvmarch=i386
+	    else
+		jvmarch="${ARCH}"
+	    fi
+	fi
+}
+
+src_unpack() {
+	unpack "${A}"
+	cd "${S}"
+
+	ebegin "Reconfiguring"
+	    find . -name configure -print | xargs rm
+	    ./maint/updatefiles
+	    use mpe-sdk && ./src/mpe2/maint/updatefiles
+	eend
+
+	# a few fixes for building the shared libs, PIC, etc
+	epatch "${FILESDIR}/${P}-cxx.patch" || die "cxx patch failed"
+	epatch "${FILESDIR}/${P}-fPIC.patch" || die "fPIC patch failed"
+	epatch "${FILESDIR}/${P}-shlib.patch" || die "createshlib patch failed"
+	epatch "${FILESDIR}/${P}-makefile.patch" || die "make patch failed"
+
+	if use pvfs2; then
+	    sed -i -e "s:-laio:-lpvfs2 -laio:g" Makefile.in \
+		|| die "sed pvfs2 failed"
+	fi
+
+	use mpe-sdk && setup-jvm-opts
+}
+
+src_compile() {
+	if use crypt ; then
+	    RSHCOMMAND="ssh -x"
+	else
+	    RSHCOMMAND="rsh"
+	fi
+	export RSHCOMMAND
+
+	local myconf="${MPICH_CONFIGURE_OPTS} --enable-sharedlibs=gcc"
+	local doc_conf=""
+	local mpe_conf=""
+
+	# update to using flag-o-matic
+	append-ldflags -Wl,-z,now
+	replace-flags -fpic -fPIC
+	filter-flags -fomit-frame-pointer
+
+	if ! use debug ; then
+	    myconf="${myconf} --enable-g=none"
+	else
+	    myconf="${myconf} --enable-g=dbg,mem,log --enable-debuginfo"
+	fi
+
+	if ! use mpe-sdk ; then
+	    myconf="${myconf} --enable-rlog=no --enable-slog2=no"
+	fi
+
+	if use threads ; then
+	    myconf="${myconf} --with-thread-package=pthreads"
+	else
+	    myconf="${myconf} --with-thread-package=none"
+	fi
+
+	# enable f90 support for appropriate compilers
+	case "${FORTRANC}" in
+	    gfortran|ifc|ifort|f95)
+		myconf="${myconf} --enable-f77 --enable-f90"
+		;;
+	    g77|f77|f2c)
+		myconf="${myconf} --enable-f77 --disable-f90"
+		;;
+	esac
+
+	if use romio; then
+	    myconf="${myconf} --enable-aio"
+	    if use pvfs2; then
+		myconf="${myconf} --with-file-system=pvfs2+nfs+ufs \
+		    --with-pvfs2=/usr"
+	    else
+		myconf="${myconf} --with-file-system=nfs+ufs"
+	    fi
+	    use debug && myconf="${myconf} --enable-debug"
+	fi
+
+	use mpe && MPE_SRC_DIR="${S}"/src/mpe2
+
+	# I'm sure there's a better way to do this...
+	if use cxx; then
+	    tc-export CPP CC CXX LD
+	    CXXLIBPATH="/usr/$(get_libdir)/gcc/${CHOST}/$(gcc-fullversion)"
+	    sed -i -e "s:nerdboy:${CXXLIBPATH}:g" Makefile.in \
+		|| die "sed 3 failed"
+	fi
+
+	if use doc; then
+	    doc_conf="--docdir=/usr/share/doc/${PF} \
+		--with-docdir=/usr/share/doc/${PF} \
+		--with-htmldir=/usr/share/doc/${PF}/html \
+		--with-pdfdir=/usr/share/doc/${PF} \
+		--with-psdir=/usr/share/doc/${PF}"
+	else
+	    doc_conf="--with-docdir=/usr/share/doc/${PF} \
+		--with-htmldir=/usr/share/doc/${PF}/html"
+	fi
+
+	if use mpe-sdk; then
+	    mpe_conf='--with-java=${JDK_TOPDIR} --with-java2=${JDK_TOPDIR} \
+		--enable-slog2=build \
+		--with-mpicc="${WORKDIR}"/build/bin/mpicc \
+		--with-mpif77="${WORKDIR}"/build/bin/mpif77 \
+		--enable-collchk --enable-graphics=yes --enable-wrappers \
+		--with-trace-libdir=/usr/$(get_libdir)/mpe/trace_rlog \
+		--with-flib_path_leader=-Wl,-L --enable-mpich \
+		--enable-misc --enable-callstack --enable-logging'
+	    use debug && mpe_conf=" ${mpe_conf} --enable-g"
+
+	    sed -i -e "s:fpic:fPIC:g" \
+		src/mpe2/src/slog2sdk/trace_sample/configure \
+		|| die "sed 1 failed"
+	    sed -i -e "s:fpic:fPIC:g" \
+		src/mpe2/src/slog2sdk/trace_rlog/configure \
+		|| die "sed 2 failed"
+	fi
+
+	# trying the vpath build
+	mkdir ../build
+	cd ../build
+
+	"${S}"/configure \
+		--with-pm=mpd,gforker \
+		${myconf} \
+		${mpe_conf} \
+		${doc_conf} \
+		$(use_enable fast) \
+		$(use_enable cxx) \
+		$(use_enable mpe) \
+		$(use_enable romio) \
+		$(use_enable threads) \
+		--libdir=/usr/$(get_libdir) \
+		--includedir=/usr/include \
+		--mandir=/usr/share/man \
+		--sysconfdir=/etc/"${PN}" \
+		--prefix=/usr --exec-prefix=/usr \
+		--datadir=/usr/share/${PN} || die "configure failed"
+
+	# no parallel make here
+	use fortran && export FFLAGS="-fPIC"
+	make dependencies || die "failed to make dependencies"
+	make || die "make failed"
+}
+
+src_test() {
+	ewarn "Tests can take a long time to complete, even on a fast box."
+	ewarn "Expected result on amd64 with gcc 4.1.1:"
+	ewarn "     6 tests failed out of 373"
+	elog ""
+	elog "Control-C now if you want to disable tests..."
+	epause
+
+	install -g portage -o portage -m 0600 "${FILESDIR}"/mpd.conf "${HOME}"/.mpd.conf
+	TEST="${WORKDIR}/build"
+
+	"${TEST}"/bin/mpd --daemon
+
+	cd "${TEST}"
+	mkdir t1
+	export MPIO_USER_PATH="${TEST}"/t1
+
+	sed -i -e "s:/usr/bin/mpiexec:${TEST}/bin/mpiexec:g" test/mpi/Makefile \
+	    || die "sed 4 failed"
+	sed -i -e "s:/usr:${TEST}:g" test/commands/cmdtests \
+	    || die "sed 5 failed"
+
+	cd test
+	make clean || die "make clean in test failed"
+
+	echo
+	elog "Using ./configure --prefix=${TEST} --with-mpi=${TEST} etc..."
+	echo
+
+	"${S}"/configure --with-mpi="${TEST}" \
+	    --exec-prefix="${TEST}" \
+	    --disable-f90 --with-mpich2="${TEST}" $(use_enable threads) \
+	    || die "configure test failed"
+
+	export LD_LIBRARY_PATH="${TEST}/lib:$LD_LIBRARY_PATH"
+	nice --adjustment=3 make testing || die "make testing failed"
+
+	"${TEST}"/bin/mpdallexit
+}
+
+src_install() {
+	dodir /etc/"${PN}"
+
+	rm -f src/mpe2/etc/*.in
+
+	cd ../build
+	make DESTDIR="${D}" LIBDIR="${D}"usr/$(get_libdir) install \
+	    || die "make install failed"
+
+	cd "${S}"
+
+	rm -f "${D}"usr/$(get_libdir)/*.jar
+	use mpe-sdk && java-pkg_dojar src/mpe2/src/slog2sdk/lib/*.jar
+
+	dodir /usr/share/doc/"${PF}"
+	if use doc; then
+	    dodoc COPYRIGHT README README.romio README.testing CHANGES
+	    dodoc README.developer RELEASE_NOTES
+	    newdoc src/pm/mpd/README README.mpd
+
+	    if use mpe-sdk; then
+		dodoc src/mpe2/src/slog2sdk/README.sdk \
+		    src/mpe2/src/slog2sdk/README.rte
+		newdoc src/mpe2/src/slog2sdk/FAQ FAQ.sdk
+	    fi
+	else
+	    rm -rf "${D}"usr/share/doc/"${PF}"/{html,*.pdf}
+	    dodoc README CHANGES COPYRIGHT RELEASE_NOTES
+	fi
+
+	# Tidy up a bit
+	use mpe-sdk && rm "${D}"usr/sbin/mpeuninstall
+}
+
+pkg_postinst() {
+	python_version
+	python_mod_optimize "${ROOT}"usr/bin
+
+	elog ""
+	elog "Several specific options are left set to default values; if"
+	elog "you wish to specify non-default values for things like the"
+	elog "timer type, timing level, devices, or communication channels,"
+	elog "please read the docs and rebuild with MPICH_CONFIGURE_OPTS"
+	elog "set to your desired options."
+	elog ""
+	elog "Note 1: enabling the MPE2 SDK requires both a JDK and the core"
+	elog "X11 library for the full set of log analysis and conversion"
+	elog "utilities.  You probably don't want to enable the mpe-sdk USE"
+	elog "flag on a server, cluster node, etc."
+	elog ""
+	elog "Note 2: this package still needs testing with other Fortran90"
+	elog "compilers besides gfortran (gcc4).  The tests also need some"
+	elog "magic to build properly within the portage build environment."
+	elog "(currently the tests only build and run manually)"
+	elog ""
+	elog "The gfortran support has been tested successfully with hdf5"
+	elog "(using gfortran and the mpif90 wrapper), however, the pvfs2"
+	elog "support is brand-spanking new."
+	elog ""
+}
+
+pkg_postrm() {
+	python_version
+	python_mod_cleanup
+}
+
+setup-jvm-opts() {
+	# Figure out correct boot classpath
+	# stolen from eclipse-sdk ebuild
+	local bp="$(java-config --jdk-home)/jre/lib"
+	local bootclasspath="$(java-config --runtime)"
+	if [[ ! -z "`java-config --java-version | grep IBM`" ]] ; then
+		# IBM JDK
+		JAVA_LIB_DIR="$(java-config --jdk-home)/jre/bin"
+	else
+		# Sun derived JDKs (Blackdown, Sun)
+		JAVA_LIB_DIR="$(java-config --jdk-home)/jre/lib/${jvmarch}"
+	fi
+
+	JDK_TOPDIR="$(java-config --jdk-home)"
+	JDK_INCDIR="$(java-config --jdk-home)/include"
+
+	elog ""
+	elog "Using bootclasspath ${bootclasspath}"
+	elog "Using JVM library path ${JAVA_LIB_DIR}"
+	elog "Using JDK Include dir ${JDK_INCDIR}"
+	elog "Using JDK Top-level dir ${JDK_TOPDIR}"
+	elog ""
+
+	if [[ ! -f "${JAVA_LIB_DIR}"/libawt.so ]] ; then
+		die "Could not find libawt.so native library"
+	fi
+
+	if [[ ! -f "${JDK_INCDIR}"/jni.h ]] ; then
+		die "Could not find jni.h header file"
+	fi
+
+	export AWT_LIB_PATH="${JAVA_LIB_DIR}"
+	export JDK_TOPDIR="${JDK_TOPDIR}"
+	export JDK_INCDIR="${JDK_INCDIR}"
+}
+