Initial import of sci-libs/flann and sci-libs/pcl ebuilds.

5 files changed, 201 insertions, 0 deletions

diff --git a/sci-libs/flann/Manifest b/sci-libs/flann/Manifest
new file mode 100644
index 0000000..7889e8b
--- /dev/null
+++ b/sci-libs/flann/Manifest
@@ -0,0 +1,5 @@
+DIST flann-1.6.10-testdata.tar.xz 26425552 RMD160 2a1b7a34f6d5361ba037b01c1afec79f911e0dcd SHA1 cf11d7fbcc82da8567d0fb73789375f00ac2bdd8 SHA256 5cfd556cae36b5901b929d82492523754dc98c7535338b7c87d55e0a63e14364
+DIST flann-1.7.0-src.zip 596775 RMD160 0610b5eeb886edc5e99d87faa76bdcbfbbccacff SHA1 50f1a1c7edf26f447fc9956bc45aa537b9b0f432 SHA256 8f548eaf8351cb3378ecd39a52b1d1c64b8e406a7a7512682be273739a2ac07d
+DIST flann-1.7.1-src.zip 582517 RMD160 cec1ce99d2c91ddf8f20d5aa8009a08c5347b904 SHA1 61b9858620528919ea60a2a4b085ccc2b3c2d138 SHA256 eafb8c07cf59ff050be149b15d620ca3dd162e3fce9cb6748cde5d92e0dac775
+EBUILD flann-1.7.0.ebuild 2324 RMD160 049785833e61d2b285d48fdc29f56de215af4967 SHA1 cd5c566e57f0dbc893d6d70dd1e535d658f44c28 SHA256 8aca9c69497544d189e32329f44417118096d86fa7e79cbd4f99df2b27828e2d
+EBUILD flann-1.7.1.ebuild 2324 RMD160 049785833e61d2b285d48fdc29f56de215af4967 SHA1 cd5c566e57f0dbc893d6d70dd1e535d658f44c28 SHA256 8aca9c69497544d189e32329f44417118096d86fa7e79cbd4f99df2b27828e2d
diff --git a/sci-libs/flann/flann-1.7.1.ebuild b/sci-libs/flann/flann-1.7.1.ebuild
new file mode 100644
index 0000000..9a76a0c
--- /dev/null
+++ b/sci-libs/flann/flann-1.7.1.ebuild
@@ -0,0 +1,81 @@
+# Copyright 1999-2012 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=3
+
+PYTHON_DEPEND="python? 2:2.5"
+
+inherit cmake-utils eutils python
+
+DESCRIPTION="Library for performing fast approximate nearest neighbor searches in high dimensional spaces"
+HOMEPAGE="http://www.cs.ubc.ca/~mariusm/index.php/FLANN/FLANN/"
+SRC_URI="http://people.cs.ubc.ca/~mariusm/uploads/FLANN/${P}-src.zip
+	test? ( http://dev.gentoo.org/~dilfridge/distfiles/${PN}-1.6.10-testdata.tar.xz )"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~ppc ~x86"
+IUSE="doc mpi octave python static-libs test"
+
+RDEPEND="sci-libs/hdf5[mpi?]
+	mpi? ( dev-libs/boost[mpi] )
+	octave? ( sci-mathematics/octave )
+	python? ( dev-python/numpy )"
+DEPEND="${RDEPEND}
+	app-arch/unzip
+	test? ( dev-cpp/gtest )"
+
+S="${WORKDIR}"/${P}-src
+
+src_prepare() {
+	# bug #302621
+	has_version sci-libs/hdf5[mpi] && export CXX=mpicxx
+	# gentoo doc directory respected
+	sed -i \
+		-e "s:share/doc/flann:share/doc/${PF}:" \
+		doc/CMakeLists.txt || die
+	# python standard installation directory respected
+	sed -i \
+		-e "/share/d" \
+		-e "/COMMAND/s:install:install --root="${ED}" --no-compile:" \
+		src/python/CMakeLists.txt || die
+	# produce pure octave files
+	# octave gentoo installation for .m files respected
+	sed -i \
+		-e 's/--mex//' \
+		-e 's/\.mex/\.oct/' \
+		-e '/FILES/s/${MEX_FILE}//' \
+		-e 's:share/flann/octave:share/octave/site/m:' \
+		-e "/CUSTOM_TARGET/a\INSTALL(FILES \${MEX_FILE} DESTINATION libexec/octave/site/oct/${CHOST})" \
+		src/matlab/CMakeLists.txt || die
+	# do not compile examples by default
+	sed -i \
+		-e '/add_subdirectory.*examples/d' \
+		CMakeLists.txt || die
+	# compile tests only when requested
+	use test || sed -i -e '/add_subdirectory.*test/d' CMakeLists.txt
+	# avoid automatic installation of pdf
+	use doc || sed -i -e '/doc/d' CMakeLists.txt
+}
+
+src_configure() {
+	local mycmakeargs=(
+		"-DBUILD_C_BINDINGS=ON"
+		$(cmake-utils_use_build octave MATLAB_BINDINGS)
+		$(cmake-utils_use_build python PYTHON_BINDINGS)
+		$(cmake-utils_use_use mpi)
+	)
+	cmake-utils_src_configure
+}
+
+src_test() {
+	cd "${CMAKE_BUILD_DIR}"
+	LD_LIBRARY_PATH="${PWD}/lib" PYTHONPATH="${S}/src/python" \
+		emake test
+}
+
+src_install() {
+	cmake-utils_src_install
+	dodoc README.md
+	use static-libs || find "${ED}" -name 'lib*.a' -exec rm -rf '{}' '+'
+}
diff --git a/sci-libs/pcl/Manifest b/sci-libs/pcl/Manifest
new file mode 100644
index 0000000..b0b69ff
--- /dev/null
+++ b/sci-libs/pcl/Manifest
@@ -0,0 +1,3 @@
+AUX pcl-1.4.0-vtkio.patch 2443 RMD160 26823e6d3b00ea32470d00a33fdea2353662f64b SHA1 b4b76b6953d4e8c93ff3f7574eda9f20c5cdbf7b SHA256 b388627bf89c16b6d5e682314311c4b9ddc4c49b7eb0c4f17d99fbc0b767280d
+DIST PCL-1.4.0-Source.tar.bz2 10626702 RMD160 440de4c12c4aba81d2b6197180df85e008eef4d9 SHA1 dc2f89cfafb098c27291549115d39cc6b425d31f SHA256 20d49246773bb54d4b9e133ef3b8b5081c94d1677d823cc0c2d03bcd5bf30a2b
+EBUILD pcl-1.4.0.ebuild 1535 RMD160 1dbaf17cc5d4490bfec87712767e3b31911b81e3 SHA1 daceb2220c31334dd9ce9129d8632ca09a076ff0 SHA256 3fef48d628c7ec352dd81c90777ae94aff52ac2a74440803b28630c42d6dd815
diff --git a/sci-libs/pcl/files/pcl-1.4.0-vtkio.patch b/sci-libs/pcl/files/pcl-1.4.0-vtkio.patch
new file mode 100644
index 0000000..690f92c
--- /dev/null
+++ b/sci-libs/pcl/files/pcl-1.4.0-vtkio.patch
@@ -0,0 +1,42 @@
+--- PCL-1.4.0-Source.old/io/CMakeLists.txt	2012-01-01 20:39:42.000000000 -0500
++++ PCL-1.4.0-Source/io/CMakeLists.txt	2012-02-19 19:45:49.000000000 -0500
+@@ -58,7 +58,7 @@
+         include (${VTK_USE_FILE})
+         set(VTK_IO_INCLUDES include/pcl/${SUBSYS_NAME}/vtk_lib_io.h)
+         set(VTK_IO_SOURCE src/vtk_lib_io.cpp)
+-        set(VTK_IO_TARGET_LINK_LIBRARIES vtkCommon vtkWidgets)
++        set(VTK_IO_TARGET_LINK_LIBRARIES vtkCommon vtkWidgets vtkIO)
+     endif ()
+ 
+     set(srcs 
+--- PCL-1.4.0-Source.old/surface/CMakeLists.txt	2012-01-01 20:39:42.000000000 -0500
++++ PCL-1.4.0-Source/surface/CMakeLists.txt	2012-02-19 20:39:37.000000000 -0500
+@@ -37,7 +37,7 @@
+                                  src/vtk_smoothing/vtk_mesh_subdivision.cpp
+                                  src/vtk_smoothing/vtk_mesh_smoothing_laplacian.cpp
+                                  src/vtk_smoothing/vtk_mesh_smoothing_windowed_sinc.cpp)
+-        set(VTK_SMOOTHING_TARGET_LINK_LIBRARIES vtkCommon vtkWidgets)
++        set(VTK_SMOOTHING_TARGET_LINK_LIBRARIES vtkCommon vtkWidgets vtkGraphics)
+     endif()
+     
+     set(srcs 
+--- PCL-1.4.0-Source.old/tools/CMakeLists.txt	2012-01-01 20:39:42.000000000 -0500
++++ PCL-1.4.0-Source/tools/CMakeLists.txt	2012-02-19 21:33:40.000000000 -0500
+@@ -83,7 +83,7 @@
+       target_link_libraries(registration_visualizer pcl_common pcl_io pcl_kdtree pcl_filters pcl_registration pcl_visualization)
+ 
+       PCL_ADD_EXECUTABLE(octree_viewer ${SUBSYS_NAME} octree_viewer.cpp)
+-      target_link_libraries(octree_viewer pcl_common pcl_io pcl_octree pcl_visualization pcl_kdtree)   
++      target_link_libraries(octree_viewer pcl_common pcl_io pcl_octree pcl_visualization pcl_kdtree vtkGraphics vtkRendering)
+ 
+       PCL_ADD_EXECUTABLE(mesh2pcd ${SUBSYS_NAME} mesh2pcd.cpp)
+       target_link_libraries(mesh2pcd pcl_common pcl_io pcl_visualization pcl_filters vtkCommon)
+@@ -92,7 +92,7 @@
+       target_link_libraries(mesh_sampling pcl_common pcl_io pcl_visualization pcl_filters vtkCommon)
+       
+       PCL_ADD_EXECUTABLE(virtual_scanner ${SUBSYS_NAME} virtual_scanner.cpp)
+-      target_link_libraries(virtual_scanner pcl_common pcl_io pcl_filters pcl_visualization vtkCommon)
++      target_link_libraries(virtual_scanner pcl_common pcl_io pcl_filters pcl_visualization vtkCommon vtkGraphics)
+ 
+       if(BUILD_OPENNI AND OPENNI_FOUND)
+         PCL_ADD_EXECUTABLE(openni_save_image ${SUBSYS_NAME} openni_save_image.cpp)
diff --git a/sci-libs/pcl/pcl-1.4.0.ebuild b/sci-libs/pcl/pcl-1.4.0.ebuild
new file mode 100644
index 0000000..b2467bf
--- /dev/null
+++ b/sci-libs/pcl/pcl-1.4.0.ebuild
@@ -0,0 +1,70 @@
+# Copyright 2008-2012 Funtoo Technologies
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=4
+
+inherit base toolchain-funcs cmake-utils
+
+MY_P=PCL-${PV}
+
+DESCRIPTION="The Point Cloud Library (or PCL) is a large scale, open project for 3D point cloud processing."
+HOMEPAGE="http://pointclouds.org"
+SRC_URI="http://dev.pointclouds.org/attachments/download/610/${MY_P}-Source.tar.bz2"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="cuda qhull sse sse2 sse3 ssse3"
+
+RDEPEND="
+	>=dev-libs/boost-1.46
+	dev-cpp/eigen:3
+	>=sci-libs/flann-1.7.1
+	>=sci-libs/vtk-5.6.0
+	cuda? ( >=dev-util/nvidia-cuda-toolkit-4 )
+	qhull? ( >=media-libs/qhull-2011.1 )
+"
+DEPEND="${RDEPEND}"
+
+
+CMAKE_BUILD_TYPE="Release"
+
+S=${WORKDIR}/${MY_P}-Source
+
+src_prepare() {
+	base_src_prepare
+
+	if has_version ">=sci-libs/vtk-5.8.0"; then
+		epatch ${FILESDIR}/${P}-vtkio.patch
+	fi
+}
+
+src_configure() {
+	local mycmakeargs=(
+		$(cmake-utils_use_enable sse SSE)
+		$(cmake-utils_use_enable sse2 SSE2)
+		$(cmake-utils_use_enable sse3 SSE3)
+		$(cmake-utils_use_enable ssse3 SSSE3)
+		$(cmake-utils_use_with qhull)
+		$(cmake-utils_use_build test TESTS)
+	)
+
+	if use cuda; then
+		if [[ "$(gcc-version)" > "4.4" ]]; then
+			ewarn "CUDA and >=sys-devel/gcc-4.5 do not play well together. Disabling CUDA support."
+			mycmakeargs+=( "-DWITH_CUDA=OFF" )
+		else
+			mycmakeargs+=( "-DWITH_CUDA=ON" )
+		fi
+	else
+		mycmakeargs+=( "-DWITH_CUDA=OFF" )
+	fi
+
+	# no openni support yet
+	mycmakeargs+=(
+		"-DWITH_OPENNI=OFF"
+	)
+
+	cmake-utils_src_configure
+}